Tmem167-ps3 Pseudogene Detail

Summary

• Symbol
  Tmem167-ps3
• Name
  transmembrane protein 167, pseudogene 3
• Synonyms
  Gm29620

• Feature Type
  pseudogene
• IDs
  MGI:5580326
  NCBI Gene: 102638608
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:13740583-13740760 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic

Strain
Comparison

• SNPs within 2kb
  18 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5580326	pseudogene	Chr7:13740583-13740885 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013815	pseudogene	Chr7:11488152-11488329 (+)
A/J	no annotation
AKR/J	MGP_AKRJ_G0013759	pseudogene	Chr7:11376047-11376224 (+)
BALB/cJ	MGP_BALBcJ_G0013797	pseudogene	Chr7:11407595-11407772 (+)
C3H/HeJ	MGP_C3HHeJ_G0013618	pseudogene	Chr7:11738719-11738896 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0014190	pseudogene	Chr7:12093432-12093609 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009975	pseudogene	Chr14:69672977-69673125 (+)
CAST/EiJ	MGP_CASTEiJ_G0013296	pseudogene	Chr7:8995267-8995444 (+)
CBA/J	MGP_CBAJ_G0013599	pseudogene	Chr7:12302750-12302927 (+)
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0013758	pseudogene	Chr7:11587210-11587387 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013691	pseudogene	Chr7:12062773-12062950 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	MGP_PWKPhJ_G0013110	pseudogene	Chr7:9398226-9398403 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012887	pseudogene	Chr7:7113067-7113244 (+)
WSB/EiJ	MGP_WSBEiJ_G0013358	pseudogene	Chr7:11164395-11164572 (+)

Homology

• Gene Tree
  Tmem167-ps3
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  17

• Ensembl
  ENSMUSG00000099744 (Evidence)
• NCBI Gene
  102638608

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000099744	Ensembl Gene Model | MGI Sequence Detail	178	C57BL/6J
transcript	ENSMUST00000186718	Ensembl | MGI Sequence Detail	178	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;