Gm29611 Gene Detail

Summary

• Symbol
  Gm29611
• Name
  predicted gene 29611

• Feature Type
  lncRNA gene
• IDs
  MGI:5580317
  NCBI Gene: 108167629
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:78593262-78597882 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic

Strain
Comparison

• SNPs within 2kb
  39 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5580317	lncRNA gene	Chr1:78593262-78597882 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004884	lincRNA gene	Chr1:79354212-79359112 (+)
A/J	MGP_AJ_G0004865	lincRNA gene	Chr1:76577090-76581710 (+)
AKR/J	MGP_AKRJ_G0004843	lincRNA gene	Chr1:78651878-78656446 (+)
BALB/cJ	MGP_BALBcJ_G0004846	lincRNA gene	Chr1:76669226-76673888 (+)
C3H/HeJ	MGP_C3HHeJ_G0004795	lincRNA gene	Chr1:79024312-79028968 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0004997	lincRNA gene	Chr1:82405692-82410348 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004424	lincRNA gene	Chr1:72002475-72007347 (+)
CAST/EiJ	MGP_CASTEiJ_G0004748	lincRNA gene	Chr1:78410224-78414879 (+)
CBA/J	MGP_CBAJ_G0004788	lincRNA gene	Chr1:85116161-85120823 (+)
DBA/2J	MGP_DBA2J_G0004806	lincRNA gene	Chr1:75892052-75896708 (+)
FVB/NJ	MGP_FVBNJ_G0004826	lincRNA gene	Chr1:75046824-75051523 (+)
LP/J	MGP_LPJ_G0004885	lincRNA gene	Chr1:80487342-80492017 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004810	lincRNA gene	Chr1:88342939-88347595 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0005001	lincRNA gene	Chr1:78792194-78796843 (+)
PWK/PhJ	MGP_PWKPhJ_G0004701	lincRNA gene	Chr1:75357663-75362325 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004627	lincRNA gene	Chr1:78128567-78135031 (+)
WSB/EiJ	MGP_WSBEiJ_G0004793	lincRNA gene	Chr1:78584716-78589371 (+)

Homology

• Gene Tree
  Gm29611
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm29611
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000100562 (Evidence)
• NCBI Gene
  108167629

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000100562	Ensembl Gene Model | MGI Sequence Detail	4621	C57BL/6J
transcript	ENSMUST00000186132	Ensembl | MGI Sequence Detail	1011	Not Applicable

References

• Summaries
  All 7

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45