Gm29513 Gene Detail

Summary

• Symbol
  Gm29513
• Name
  predicted gene 29513

• Feature Type
  lncRNA gene
• IDs
  MGI:5580219
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:121708234-121708435 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic

Strain
Comparison

• SNPs within 2kb
  6 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5580219	lncRNA gene	Chr11:121708234-121708435 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0005337	lincRNA gene	Chr11:126373355-126373557 (+)
A/J	MGP_AJ_G0005320	lincRNA gene	Chr11:120723322-120723523 (+)
AKR/J	MGP_AKRJ_G0005299	lincRNA gene	Chr11:124391082-124391283 (+)
BALB/cJ	MGP_BALBcJ_G0005302	lincRNA gene	Chr11:121104370-121104572 (+)
C3H/HeJ	MGP_C3HHeJ_G0005251	lincRNA gene	Chr11:124720479-124720680 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0005455	lincRNA gene	Chr11:130203602-130203803 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004843	lincRNA gene	Chr11:117712906-117713114 (+)
CAST/EiJ	MGP_CASTEiJ_G0005198	lincRNA gene	Chr11:126210233-126210439 (+)
CBA/J	MGP_CBAJ_G0005240	lincRNA gene	Chr11:135269367-135269568 (+)
DBA/2J	MGP_DBA2J_G0005258	lincRNA gene	Chr11:120116159-120116360 (+)
FVB/NJ	MGP_FVBNJ_G0005283	lincRNA gene	Chr11:119841286-119841488 (+)
LP/J	MGP_LPJ_G0005339	lincRNA gene	Chr11:126659525-126659726 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0005265	lincRNA gene	Chr11:134046339-134046540 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0005458	lincRNA gene	Chr11:125082763-125082965 (+)
PWK/PhJ	MGP_PWKPhJ_G0005147	lincRNA gene	Chr11:121547606-121547808 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0005067	lincRNA gene	Chr11:124816025-124816229 (+)
WSB/EiJ	MGP_WSBEiJ_G0005246	lincRNA gene	Chr11:125042326-125042527 (+)

Homology

• Gene Tree
  Gm29513
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000099690 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000099690	Ensembl Gene Model | MGI Sequence Detail	202	C57BL/6J
transcript	ENSMUST00000185741	Ensembl | MGI Sequence Detail	202	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;