Gm29502 Gene Detail

Summary

• Symbol
  Gm29502
• Name
  predicted gene 29502

• Feature Type
  lncRNA gene
• IDs
  MGI:5580208
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr13:100983941-101114423 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic

Strain
Comparison

• SNPs within 2kb
  704 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5580208	lncRNA gene	Chr13:100983941-101114423 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0005503	lincRNA gene	Chr13:102791053-102928732 (+)
A/J	MGP_AJ_G0005489	lincRNA gene	Chr13:98799617-98931503 (+)
AKR/J	MGP_AKRJ_G0005468	lincRNA gene	Chr13:101822324-101955247 (+)
BALB/cJ	MGP_BALBcJ_G0005471	lincRNA gene	Chr13:99524290-99652437 (+)
C3H/HeJ	MGP_C3HHeJ_G0005418	lincRNA gene	Chr13:101538509-101692765 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0005626	lincRNA gene	Chr13:105874292-106019565 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005000	lincRNA gene	Chr13:94612568-94731084 (+)
CAST/EiJ	MGP_CASTEiJ_G0005360	lincRNA gene	Chr13:101009024-101147894 (+)
CBA/J	MGP_CBAJ_G0005407	lincRNA gene	Chr13:110032394-110189863 (+)
DBA/2J	MGP_DBA2J_G0005423	lincRNA gene	Chr13:98605185-98731985 (+)
FVB/NJ	MGP_FVBNJ_G0005449	lincRNA gene	Chr13:97320478-97446129 (+)
LP/J	MGP_LPJ_G0005507	lincRNA gene	Chr13:102843027-102980508 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0005432	lincRNA gene	Chr13:110272778-110413562 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0005626	lincRNA gene	Chr13:101280029-101420972 (+)
PWK/PhJ	MGP_PWKPhJ_G0005311	lincRNA gene	Chr13:97312219-97439800 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0005230	lincRNA gene	Chr13:97510346-97640836 (+)
WSB/EiJ	MGP_WSBEiJ_G0005410	lincRNA gene	Chr13:101754716-101890664 (+)

Homology

• Gene Tree
  Gm29502
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  1
• Transgenic
  1
• Genomic Mutations
  1 involving Gm29502
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000100596 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000100596	Ensembl Gene Model | MGI Sequence Detail	130483	C57BL/6J
transcript	ENSMUST00000185979	Ensembl | MGI Sequence Detail	3739	Not Applicable

References

• Summaries
  All 8

  Diseases 1

  Phenotypes 6
• Earliest
  J:156741 Kuo YM, et al., Extensive enteric nervous system abnormalities in mice transgenic for artificial chromosomes containing Parkinson disease-associated alpha-synuclein gene mutations precede central nervous system changes. Hum Mol Genet. 2010 May 1;19(9):1633-50
• Latest
  J:344232 Chandra R, et al., Gut mucosal cells transfer alpha-synuclein to the vagus nerve. JCI Insight. 2023;8(23):e172192