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Gm29398 Gene Detail
Summary
  • Symbol
    Gm29398
  • Name
    predicted gene 29398
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5580104
    NCBI Gene: 105246724
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:149289002-149325717 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, Syntenic
Strain
Comparison
more
  • SNPs within 2kb
    523 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5580104
 lncRNA gene Chr1:149286471-149325717 (-)
129S1/SvImJ MGP_129S1SvImJ_G0004993
 lincRNA gene Chr1:154037054-154076534 (-)
A/J MGP_AJ_G0004975
 lincRNA gene Chr1:147764421-147807489 (-)
AKR/J MGP_AKRJ_G0004952
 lincRNA gene Chr1:152327060-152363744 (-)
BALB/cJ MGP_BALBcJ_G0004956
 lincRNA gene Chr1:148357074-148394464 (-)
C3H/HeJ MGP_C3HHeJ_G0004905
 lincRNA gene Chr1:152512391-152551258 (-)
C57BL/6NJ MGP_C57BL6NJ_G0005106
 lincRNA gene Chr1:159372959-159410458 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0004519
 lincRNA gene Chr1:140199280-140227259 (-)
CAST/EiJ MGP_CASTEiJ_G0004853
 lincRNA gene Chr1:151942623-151984265 (-)
CBA/J MGP_CBAJ_G0004896
 lincRNA gene Chr1:164985754-165025672 (-)
DBA/2J MGP_DBA2J_G0004915
 lincRNA gene Chr1:146863328-146904965 (-)
FVB/NJ MGP_FVBNJ_G0004935
 lincRNA gene Chr1:145298686-145336900 (-)
LP/J MGP_LPJ_G0004992
 lincRNA gene Chr1:155011460-155048166 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0004919
 lincRNA gene Chr1:172622985-172661524 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0005111
 lincRNA gene Chr1:152129719-152168383 (-)
PWK/PhJ MGP_PWKPhJ_G0004805
 lincRNA gene Chr1:145794162-145834343 (-)
SPRET/EiJ MGP_SPRETEiJ_G0004731
 lincRNA gene Chr1:150763601-150798547 (-)
WSB/EiJ MGP_WSBEiJ_G0004900
 lincRNA gene Chr1:152230709-152272566 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
  • All Sequences
    27
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000101011 Ensembl Gene Model | MGI Sequence Detail 36716 C57BL/6J ±  kb
transcript ENSMUST00000186355 Ensembl | MGI Sequence Detail 1491 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2
References
more
  • Summaries
    All 7
    Phenotypes 2
  • Earliest
    J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
  • Latest
    J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory