Gm29367 Gene Detail

Summary

• Symbol
  Gm29367
• Name
  predicted gene 29367

• Feature Type
  lncRNA gene
• IDs
  MGI:5580073
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:141603018-141604344 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic

Strain
Comparison

• SNPs within 2kb
  47 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5580073	lncRNA gene	Chr4:141603018-141604344 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0006554	lincRNA gene	Chr4:144978181-144979568 (+)
A/J	MGP_AJ_G0006546	lincRNA gene	Chr4:138658664-138659990 (+)
AKR/J	MGP_AKRJ_G0006520	lincRNA gene	Chr4:142687661-142689054 (+)
BALB/cJ	MGP_BALBcJ_G0006520	lincRNA gene	Chr4:139345343-139346736 (+)
C3H/HeJ	MGP_C3HHeJ_G0006470	lincRNA gene	Chr4:143045521-143046914 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0006686	lincRNA gene	Chr4:150017934-150019260 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005963	lincRNA gene	Chr4:131563391-131564802 (+)
CAST/EiJ	MGP_CASTEiJ_G0006401	lincRNA gene	Chr4:141311781-141313176 (+)
CBA/J	MGP_CBAJ_G0006453	lincRNA gene	Chr4:154443243-154444636 (+)
DBA/2J	MGP_DBA2J_G0006475	lincRNA gene	Chr4:139044924-139046311 (+)
FVB/NJ	MGP_FVBNJ_G0006496	lincRNA gene	Chr4:138170388-138171775 (+)
LP/J	MGP_LPJ_G0006555	lincRNA gene	Chr4:144983065-144984452 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0006483	lincRNA gene	Chr4:158168403-158169790 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0006690	lincRNA gene	Chr4:143209706-143211093 (+)
PWK/PhJ	MGP_PWKPhJ_G0006339	lincRNA gene	Chr4:135943246-135944633 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0006248	lincRNA gene	Chr4:139014630-139016033 (+)
WSB/EiJ	MGP_WSBEiJ_G0006447	lincRNA gene	Chr4:143469213-143470539 (+)

Homology

• Gene Tree
  Gm29367
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Targeted
  1
• Genomic Mutations
  3 involving Gm29367
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000100396 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000100396	Ensembl Gene Model | MGI Sequence Detail	1327	C57BL/6J
transcript	ENSMUST00000190911	Ensembl | MGI Sequence Detail	1327	Not Applicable

References

• Summaries
  All 5

  Phenotypes 3
• Earliest
  J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8