Gm29293 Pseudogene Detail

Summary

• Symbol
  Gm29293
• Name
  predicted gene 29293

• Feature Type
  pseudogene
• IDs
  MGI:5579999
  NCBI Gene: 102636029
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:40619343-40623962 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic

Strain
Comparison

• SNPs within 2kb
  85 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5579999	pseudogene	Chr7:40619343-40623962 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0040566	pseudogene	Chr7:40624322-40628941 (+)
A/J	MGP_AJ_G0040556	pseudogene	Chr7:39682559-39687179 (+)
AKR/J	MGP_AKRJ_G0040481	pseudogene	Chr7:40858306-40862925 (+)
BALB/cJ	MGP_BALBcJ_G0040552	pseudogene	Chr7:39934946-39939565 (+)
C3H/HeJ	MGP_C3HHeJ_G0040186	pseudogene	Chr7:41473640-41478259 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0041218	pseudogene	Chr7:42618291-42622910 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0039236	pseudogene	Chr7:32614693-32620716 (+)
CBA/J	MGP_CBAJ_G0040156	pseudogene	Chr7:43953983-43958602 (+)
DBA/2J	MGP_DBA2J_G0040361	pseudogene	Chr7:39604254-39609628 (+)
FVB/NJ	MGP_FVBNJ_G0040298	pseudogene	Chr7:39339100-39344140 (+)
LP/J	MGP_LPJ_G0040396	pseudogene	Chr7:41016631-41022248 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0040291	pseudogene	Chr7:42729920-42735702 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0041270	pseudogene	Chr7:40213662-40219477 (+)
PWK/PhJ	MGP_PWKPhJ_G0038910	pseudogene	Chr7:32609207-32614291 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0038614	pseudogene	Chr7:28930094-28935228 (+)
WSB/EiJ	MGP_WSBEiJ_G0039486	pseudogene	Chr7:40652417-40657036 (+)

Homology

• Gene Tree
  Gm29293
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000099768 (Evidence)
• NCBI Gene
  102636029

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000099768	Ensembl Gene Model | MGI Sequence Detail	4620	C57BL/6J
transcript	ENSMUST00000189416	Ensembl | MGI Sequence Detail	2188	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;