Gm29247 Gene Detail

Summary

• Symbol
  Gm29247
• Name
  predicted gene 29247

• Feature Type
  lncRNA gene
• IDs
  MGI:5579953
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:44130623-44149950 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic

Strain
Comparison

• SNPs within 2kb
  184 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5579953	lncRNA gene	Chr1:44130623-44149950 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0015096	unclassified non-coding RNA gene	Chr1:43131569-43151400 (-)
A/J	MGP_AJ_G0015069	unclassified non-coding RNA gene	Chr1:41793139-41811938 (-)
AKR/J	MGP_AKRJ_G0015032	unclassified non-coding RNA gene	Chr1:42372099-42392361 (-)
BALB/cJ	MGP_BALBcJ_G0015032	unclassified non-coding RNA gene	Chr1:41477201-41496424 (-)
C3H/HeJ	MGP_C3HHeJ_G0014855	unclassified non-coding RNA gene	Chr1:42754678-42775736 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0015489	unclassified non-coding RNA gene	Chr1:44867272-44886325 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013236	unclassified non-coding RNA gene	Chr1:38634059-38649648 (-)
CAST/EiJ	MGP_CASTEiJ_G0014410	unclassified non-coding RNA gene	Chr1:42775465-42799935 (-)
CBA/J	MGP_CBAJ_G0014834	unclassified non-coding RNA gene	Chr1:46169448-46193643 (-)
DBA/2J	MGP_DBA2J_G0014927	unclassified non-coding RNA gene	Chr1:41099283-41118308 (-)
FVB/NJ	MGP_FVBNJ_G0014939	unclassified non-coding RNA gene	Chr1:40600521-40619371 (-)
LP/J	MGP_LPJ_G0015010	unclassified non-coding RNA gene	Chr1:43449868-43470209 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014966	unclassified non-coding RNA gene	Chr1:48146768-48166160 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015527	unclassified non-coding RNA gene	Chr1:42593497-42612648 (-)
PWK/PhJ	MGP_PWKPhJ_G0014203	unclassified non-coding RNA gene	Chr1:40973056-40992559 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0013992	unclassified non-coding RNA gene	Chr1:42617268-42638466 (-)
WSB/EiJ	MGP_WSBEiJ_G0014514	unclassified non-coding RNA gene	Chr1:42637609-42657762 (-)

Homology

• Gene Tree
  Gm29247
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm29247
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000101104 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000101104	Ensembl Gene Model | MGI Sequence Detail	19328	C57BL/6J
transcript	ENSMUST00000148542	Ensembl | MGI Sequence Detail	571	Not Applicable

References

• Summaries
  All 4

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;