About   Help   FAQ
Btf3-ps17 Pseudogene Detail
Summary
  • Symbol
    Btf3-ps17
  • Name
    basic transcription factor 3, pseudogene 17
  • Synonyms
    Gm29138
Location &
Maps
more
  • Sequence Map
    Chr1:55409172-55409486 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, Syntenic
Strain
Comparison
more
  • SNPs within 2kb
    29 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5579844
pseudogene Chr1:55409172-55409522 (-)
129S1/SvImJ MGP_129S1SvImJ_G0010145
pseudogene Chr1:55104402-55104749 (-)
A/J MGP_AJ_G0010134
pseudogene Chr1:53200037-53200384 (-)
AKR/J MGP_AKRJ_G0010111
pseudogene Chr1:54633627-54633974 (-)
BALB/cJ MGP_BALBcJ_G0010121
pseudogene Chr1:53232045-53232392 (-)
C3H/HeJ MGP_C3HHeJ_G0010051
pseudogene Chr1:54877730-54878077 (-)
C57BL/6NJ MGP_C57BL6NJ_G0010369
pseudogene Chr1:57379397-57379744 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0009886
pseudogene Chr1:54163231-54163578 (-)
CBA/J MGP_CBAJ_G0010021
pseudogene Chr1:59023819-59024166 (-)
DBA/2J MGP_DBA2J_G0010047
pseudogene Chr1:52608917-52609264 (-)
FVB/NJ MGP_FVBNJ_G0010069
pseudogene Chr1:51949342-51949689 (-)
LP/J MGP_LPJ_G0010136
pseudogene Chr1:55938594-55938941 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0010030
pseudogene Chr1:62110125-62110472 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0010347
pseudogene Chr1:54577277-54577624 (-)
PWK/PhJ MGP_PWKPhJ_G0009789
pseudogene Chr1:51975112-51975459 (-)
SPRET/EiJ MGP_SPRETEiJ_G0009602
pseudogene Chr1:54193843-54194190 (-)
WSB/EiJ MGP_WSBEiJ_G0009950
pseudogene Chr1:54272105-54272452 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Btf3-ps17
  • Find Mice (IMSR)
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic 101055993 NCBI Gene Model | MGI Sequence Detail 315 C57BL/6J ±  kb
transcript XM_036155644 RefSeq | MGI Sequence Detail 315 C57BL/6J  
polypeptide XP_036011537 RefSeq | MGI Sequence Detail 98 C57BL/6J  
For the selected sequence
References
more
  • Summaries
    All 9
    Phenotypes 4
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
08/09/2022
MGI 6.21
The Jackson Laboratory