Gm28995 Pseudogene Detail

Summary

• Symbol
  Gm28995
• Name
  predicted gene 28995

• Feature Type
  pseudogene
• IDs
  MGI:5579701
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:78409989-78410249 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic

Strain
Comparison

• SNPs within 2kb
  12 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5579701	pseudogene	Chr1:78409989-78410249 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0039892	pseudogene	Chr1:79154344-79154604 (+)
A/J	MGP_AJ_G0039899	pseudogene	Chr1:76389014-76389274 (+)
AKR/J	MGP_AKRJ_G0039821	pseudogene	Chr1:78445747-78446007 (+)
BALB/cJ	MGP_BALBcJ_G0039877	pseudogene	Chr1:76467844-76468104 (+)
C3H/HeJ	MGP_C3HHeJ_G0039523	pseudogene	Chr1:78826861-78827121 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0040443	pseudogene	Chr1:82200514-82200897 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0037068	pseudogene	Chr1:182660784-182661059 (-)
CAST/EiJ	MGP_CASTEiJ_G0038640	pseudogene	Chr1:78202084-78202345 (+)
CBA/J	MGP_CBAJ_G0039488	pseudogene	Chr1:84900153-84900413 (+)
DBA/2J	MGP_DBA2J_G0039694	pseudogene	Chr1:75687546-75687806 (+)
FVB/NJ	MGP_FVBNJ_G0039655	pseudogene	Chr1:74859460-74859720 (+)
LP/J	MGP_LPJ_G0039728	pseudogene	Chr1:80293734-80293994 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039647	pseudogene	Chr1:88144957-88145217 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040540	pseudogene	Chr1:78588766-78589026 (+)
PWK/PhJ	MGP_PWKPhJ_G0038319	pseudogene	Chr1:75161961-75162344 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0038093	pseudogene	Chr1:196353943-196354218 (-)
WSB/EiJ	MGP_WSBEiJ_G0038856	pseudogene	Chr1:78389142-78389402 (+)

Homology

• Gene Tree
  Gm28995
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm28995
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000101798 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000101798	Ensembl Gene Model | MGI Sequence Detail	261	C57BL/6J
transcript	ENSMUST00000186625	Ensembl | MGI Sequence Detail	261	Not Applicable

References

• Summaries
  All 6

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45