Gm28912 Pseudogene Detail

Summary

• Symbol
  Gm28912
• Name
  predicted gene 28912

• Feature Type
  pseudogene
• IDs
  MGI:5579618
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:123215303-123215536 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic

Strain
Comparison

• SNPs within 2kb
  26 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5579618	pseudogene	Chr1:123215303-123215536 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010331	pseudogene	Chr1:126220505-126220753 (+)
A/J	MGP_AJ_G0010321	pseudogene	Chr1:121656333-121656581 (+)
AKR/J	MGP_AKRJ_G0010290	pseudogene	Chr1:125213555-125213788 (+)
BALB/cJ	MGP_BALBcJ_G0010296	pseudogene	Chr1:121956878-121957126 (+)
C3H/HeJ	MGP_C3HHeJ_G0010232	pseudogene	Chr1:125424125-125424373 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010572	pseudogene	Chr1:131024149-131024382 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009259	pseudogene	Chr1:115186836-115187085 (+)
CAST/EiJ	MGP_CASTEiJ_G0010055	pseudogene	Chr1:124259919-124260181 (+)
CBA/J	MGP_CBAJ_G0010201	pseudogene	Chr1:135506903-135507151 (+)
DBA/2J	MGP_DBA2J_G0010234	pseudogene	Chr1:120700894-120701127 (+)
FVB/NJ	MGP_FVBNJ_G0010257	pseudogene	Chr1:119422786-119423019 (+)
LP/J	MGP_LPJ_G0010317	pseudogene	Chr1:127560196-127560444 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010213	pseudogene	Chr1:141340456-141340689 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010534	pseudogene	Chr1:124975763-124976011 (+)
PWK/PhJ	MGP_PWKPhJ_G0009958	pseudogene	Chr1:119655993-119656235 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0009770	pseudogene	Chr1:123914059-123914334 (+)
WSB/EiJ	MGP_WSBEiJ_G0010122	pseudogene	Chr1:124864670-124864912 (+)

Homology

• Gene Tree
  Gm28912
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Gm28912
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000101495 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000101495	Ensembl Gene Model | MGI Sequence Detail	234	C57BL/6J
transcript	ENSMUST00000189001	Ensembl | MGI Sequence Detail	234	Not Applicable

References

• Summaries
  All 6

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45