Gm28822 Gene Detail

Summary

• Symbol
  Gm28822
• Name
  predicted gene 28822

• Feature Type
  lncRNA gene
• IDs
  MGI:5579528
  NCBI Gene: 105243890
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:23613668-23635745 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic

Strain
Comparison

• SNPs within 2kb
  163 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5579528	lncRNA gene	Chr1:23613668-23635745 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004786	lincRNA gene	Chr1:21374928-21397301 (+)
A/J	MGP_AJ_G0004767	lincRNA gene	Chr1:20967796-20989711 (+)
AKR/J	MGP_AKRJ_G0004746	lincRNA gene	Chr1:21155143-21177263 (+)
BALB/cJ	MGP_BALBcJ_G0004749	lincRNA gene	Chr1:20714563-20739904 (+)
C3H/HeJ	MGP_C3HHeJ_G0004697	lincRNA gene	Chr1:21173437-21197066 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0004899	lincRNA gene	Chr1:22344508-22373094 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004332	lincRNA gene	Chr1:19079011-19099106 (+)
CAST/EiJ	MGP_CASTEiJ_G0004653	lincRNA gene	Chr1:21292989-21317868 (+)
CBA/J	MGP_CBAJ_G0004690	lincRNA gene	Chr1:22897288-22921999 (+)
DBA/2J	MGP_DBA2J_G0004708	lincRNA gene	Chr1:20467815-20493292 (+)
FVB/NJ	MGP_FVBNJ_G0004728	lincRNA gene	Chr1:20239355-20261222 (+)
LP/J	MGP_LPJ_G0004787	lincRNA gene	Chr1:21589600-21615568 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004713	lincRNA gene	Chr1:23903444-23927494 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004903	lincRNA gene	Chr1:21100356-21125274 (+)
PWK/PhJ	MGP_PWKPhJ_G0004605	lincRNA gene	Chr1:20237901-20260262 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004533	lincRNA gene	Chr1:21203939-21234399 (+)
WSB/EiJ	MGP_WSBEiJ_G0004695	lincRNA gene	Chr1:21029610-21055534 (+)

Homology

• Gene Tree
  Gm28822
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm28822
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000099503 (Evidence)
• NCBI Gene
  105243890

Representative Sequences			Length	Strain/Species
genomic	105243890	NCBI Gene Model | MGI Sequence Detail	22078	C57BL/6J
transcript	NR_151529	RefSeq | MGI Sequence Detail	779	ZRU/MplStud

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;