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Gm28729 Gene Detail
Summary
  • Symbol
    Gm28729
  • Name
    predicted gene 28729
  • Feature Type
    protein coding gene
  • IDs
    MGI:5579435
    NCBI Gene: 102635744
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr9:96486001-96525264 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, Syntenic
Strain
Comparison
more
  • SNPs within 2kb
    670 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5579435
protein coding gene Chr9:96485987-96525852 (-)
129S1/SvImJ MGP_129S1SvImJ_G0007486
lincRNA gene Chr9:97715610-97722387 (-)
A/J MGP_AJ_G0007481
lincRNA gene Chr9:94304796-94311158 (-)
AKR/J MGP_AKRJ_G0007453
lincRNA gene Chr9:96611891-96618701 (-)
BALB/cJ MGP_BALBcJ_G0007458
lincRNA gene Chr9:93987736-93994545 (-)
C3H/HeJ MGP_C3HHeJ_G0007403
lincRNA gene Chr9:97010946-97017755 (-)
C57BL/6NJ MGP_C57BL6NJ_G0007630
lincRNA gene Chr9:100514292-100521102 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0007306
lincRNA gene Chr9:96786340-96793226 (-)
CBA/J MGP_CBAJ_G0007384
lincRNA gene Chr9:104016087-104022896 (-)
DBA/2J MGP_DBA2J_G0007410
lincRNA gene Chr9:93825869-93832678 (-)
FVB/NJ MGP_FVBNJ_G0007426
lincRNA gene Chr9:92673812-92680621 (-)
LP/J MGP_LPJ_G0007490
lincRNA gene Chr9:97983607-97990416 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0007407
lincRNA gene Chr9:106009371-106016181 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0007635
lincRNA gene Chr9:96843909-96850864 (-)
PWK/PhJ MGP_PWKPhJ_G0007247
lincRNA gene Chr9:94000056-94007051 (-)
SPRET/EiJ MGP_SPRETEiJ_G0007151
lincRNA gene Chr9:96889534-96896776 (-)
WSB/EiJ MGP_WSBEiJ_G0007366
lincRNA gene Chr9:96704575-96711385 (-)



Homology
more
  • Human Ortholog
    LINC02618, long intergenic non-protein coding RNA 2618
  • Vertebrate Orthologs
    5
  • Human Ortholog
    LINC02618, long intergenic non-protein coding RNA 2618
    Orthology source: HomoloGene
  • Links
    NCBI Gene ID: 646730

  • Chr Location
    3q23; chr3:141663199-141721074 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    1
  • Gene trapped
    2
  • Genomic Mutations
    1 involving Gm28729
  • Find Mice (IMSR)
Expression
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000099564 Ensembl Gene Model | MGI Sequence Detail 39264 C57BL/6J ±  kb
transcript ENSMUST00000190704 Ensembl | MGI Sequence Detail 1964 Not Applicable  
polypeptide ENSMUSP00000148097 Ensembl | MGI Sequence Detail 409 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR032675 Leucine-rich repeat domain superfamily
References
more
  • Summaries
    All 11
    Phenotypes 5
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
12/03/2019
MGI 6.14
The Jackson Laboratory