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Gm28539 Gene Detail
Summary
  • Symbol
    Gm28539
  • Name
    predicted gene 28539
  • Feature Type
    protein coding gene
  • IDs
    MGI:5579245
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr16:18655334-18774997 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 16, Syntenic
Strain
Comparison
more
  • SNPs within 2kb
    88 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5579245
 protein coding gene Chr16:18655334-18774997 (+)
129S1/SvImJ MGP_129S1SvImJ_G0022621
 protein coding gene Chr16:16101899-16224337 (+)
A/J MGP_AJ_G0022582
 protein coding gene Chr16:15293539-15412742 (+)
AKR/J MGP_AKRJ_G0022559
 protein coding gene Chr16:15911266-16037603 (+)
BALB/cJ MGP_BALBcJ_G0022587
 protein coding gene Chr16:15445101-15575722 (+)
C3H/HeJ MGP_C3HHeJ_G0022354
 protein coding gene Chr16:16063188-16192875 (+)
C57BL/6NJ MGP_C57BL6NJ_G0023036
 protein coding gene Chr16:16418400-16539385 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0020556
 protein coding gene Chr16:15327674-16204483 (+)
CAST/EiJ MGP_CASTEiJ_G0021881
 protein coding gene Chr16:15961119-16077319 (+)
CBA/J MGP_CBAJ_G0022323
 protein coding gene Chr16:17087466-17219299 (+)
DBA/2J MGP_DBA2J_G0022455
 protein coding gene Chr16:15205258-15323111 (+)
FVB/NJ MGP_FVBNJ_G0022430
 protein coding gene Chr16:15269427-15393440 (+)
LP/J MGP_LPJ_G0022522
 protein coding gene Chr16:15848995-15976900 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0022452
 protein coding gene Chr16:16726931-16865266 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0023047
 protein coding gene Chr16:15829946-15953162 (+)
PWK/PhJ MGP_PWKPhJ_G0021623
 protein coding gene Chr16:15500431-15613938 (+)
SPRET/EiJ MGP_SPRETEiJ_G0021451
 protein coding gene Chr16:15790391-15903526 (+)
WSB/EiJ MGP_WSBEiJ_G0021927
 protein coding gene Chr16:15855745-15976909 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    22
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000099908 Ensembl Gene Model | MGI Sequence Detail 119664 C57BL/6J ±  kb
transcript ENSMUST00000190050 Ensembl | MGI Sequence Detail 2982 Not Applicable  
polypeptide ENSMUSP00000141101 Ensembl | MGI Sequence Detail 92 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR021475 Plasticity-Associated Neural Transcript Short/Early meiotic induction protein 1-like
References
more
  • Summaries
    All 7
    Phenotypes 4
  • Earliest
    J:67409 Lindsay EA, et al., Tbx1 haploinsufficiency in the DiGeorge syndrome region causes aortic arch defects in mice. Nature. 2001 Mar 1;410(6824):97-101
  • Latest
    J:304974 Saito R, et al., Two novel mouse models mimicking minor deletions in 22q11.2 deletion syndrome revealed the contribution of each deleted region to psychiatric disorders. Mol Brain. 2021 Apr 12;14(1):68
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory