Gm28374 Gene Detail

Summary

• Symbol
  Gm28374
• Name
  predicted gene 28374

• Feature Type
  protein coding gene
• IDs
  MGI:5579080
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr19:6126975-6132286 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic

Strain
Comparison

• SNPs within 2kb
  33 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5579080	protein coding gene	Chr19:6126975-6132286 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0024744	protein coding gene	Chr19:3106144-3111697 (-)
A/J	MGP_AJ_G0024710	protein coding gene	Chr19:2935871-2941163 (-)
AKR/J	MGP_AKRJ_G0024683	protein coding gene	Chr19:3026184-3031476 (-)
BALB/cJ	MGP_BALBcJ_G0024710	protein coding gene	Chr19:2930190-2935482 (-)
C3H/HeJ	MGP_C3HHeJ_G0024478	protein coding gene	Chr19:3044879-3050171 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0025156	protein coding gene	Chr19:3167002-3172442 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0022590	protein coding gene	Chr19:2863796-2869157 (-)
CAST/EiJ	MGP_CASTEiJ_G0023950	protein coding gene	Chr19:3051963-3057228 (-)
CBA/J	MGP_CBAJ_G0024450	protein coding gene	Chr19:3317761-3323050 (-)
DBA/2J	MGP_DBA2J_G0024577	protein coding gene	Chr19:2926104-2931397 (-)
FVB/NJ	MGP_FVBNJ_G0024543	protein coding gene	Chr19:2937181-2942465 (-)
LP/J	MGP_LPJ_G0024663	protein coding gene	Chr19:3084396-3089703 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0024572	protein coding gene	Chr19:3136379-3142784 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0025204	protein coding gene	Chr19:3057175-3062475 (-)
PWK/PhJ	MGP_PWKPhJ_G0023696	protein coding gene	Chr19:2954824-2960042 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0023501	protein coding gene	Chr19:3014517-3019698 (-)
WSB/EiJ	MGP_WSBEiJ_G0024012	protein coding gene	Chr19:3062809-3068099 (-)

Homology

• Gene Tree
  Gm28374
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• UniProt
  1

• Ensembl
  ENSMUSG00000100621 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000100621	Ensembl Gene Model | MGI Sequence Detail	5312	C57BL/6J
transcript	ENSMUST00000162374	Ensembl | MGI Sequence Detail	728	Not Applicable
polypeptide	ENSMUSP00000124641	Ensembl | MGI Sequence Detail	52	Not Applicable

Protein
Information

• UniProt
  1 Sequence

References

• Summaries
  All 3
• Earliest
  J:53168 Bairoch A, et al., SWISS-PROT Annotated protein sequence database. Database Release. 1999;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

TSS for Gm28374:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr157823	Chr19:6130341-6130366 (-)	1,932 bp