Gm28341 Pseudogene Detail

Summary

• Symbol
  Gm28341
• Name
  predicted gene 28341

• Feature Type
  pseudogene
• IDs
  MGI:5579047
  NCBI Gene: 118567642
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:19390450-19390921 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic

Strain
Comparison

• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5579047	pseudogene	Chr1:19390405-19390943 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0010021	pseudogene	Chr1:16936335-16936806 (-)
A/J	MGP_AJ_G0010002	pseudogene	Chr1:16739998-16740469 (-)
AKR/J	MGP_AKRJ_G0009985	pseudogene	Chr1:16750014-16750485 (-)
BALB/cJ	MGP_BALBcJ_G0009991	pseudogene	Chr1:16387143-16387614 (-)
C3H/HeJ	MGP_C3HHeJ_G0009922	pseudogene	Chr1:16804581-16805052 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0010241	pseudogene	Chr1:17711287-17711758 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009015	pseudogene	Chr1:15012409-15012873 (-)
CAST/EiJ	MGP_CASTEiJ_G0009770	pseudogene	Chr1:16883816-16884287 (-)
CBA/J	MGP_CBAJ_G0009895	pseudogene	Chr1:18121264-18121735 (-)
DBA/2J	MGP_DBA2J_G0009919	pseudogene	Chr1:16254645-16255116 (-)
FVB/NJ	MGP_FVBNJ_G0009944	pseudogene	Chr1:16057808-16058279 (-)
LP/J	MGP_LPJ_G0010012	pseudogene	Chr1:17138695-17139166 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0009904	pseudogene	Chr1:19069182-19069653 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010216	pseudogene	Chr1:16730892-16731363 (-)
PWK/PhJ	MGP_PWKPhJ_G0009674	pseudogene	Chr1:16028259-16028730 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0009492	pseudogene	Chr1:16810474-16810945 (-)
WSB/EiJ	MGP_WSBEiJ_G0009832	pseudogene	Chr1:16667848-16668319 (-)

Homology

• Gene Tree
  Gm28341
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000101117 (Evidence)
• NCBI Gene
  118567642

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000101117	Ensembl Gene Model | MGI Sequence Detail	472	C57BL/6J
transcript	ENSMUST00000190883	Ensembl | MGI Sequence Detail	472	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;