Gm28306 Gene Detail

Summary

• Symbol
  Gm28306
• Name
  predicted gene 28306

• Feature Type
  lncRNA gene
• IDs
  MGI:5579012
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:34478592-34483811 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic

Strain
Comparison

• SNPs within 2kb
  99 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5579012	lncRNA gene	Chr1:34478592-34483811 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0002656	antisense lncRNA gene	Chr1:32824327-32829261 (-)
A/J	MGP_AJ_G0002632	antisense lncRNA gene	Chr1:32042459-32047667 (-)
AKR/J	MGP_AKRJ_G0002612	antisense lncRNA gene	Chr1:32428503-32435249 (-)
BALB/cJ	MGP_BALBcJ_G0002618	antisense lncRNA gene	Chr1:31691252-31696464 (-)
C3H/HeJ	MGP_C3HHeJ_G0002578	antisense lncRNA gene	Chr1:32628019-32633182 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0002762	antisense lncRNA gene	Chr1:34318075-34325261 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002309	antisense lncRNA gene	Chr1:29202841-29208081 (-)
CAST/EiJ	MGP_CASTEiJ_G0002551	antisense lncRNA gene	Chr1:32484152-32489399 (-)
CBA/J	MGP_CBAJ_G0002573	antisense lncRNA gene	Chr1:35275739-35280960 (-)
DBA/2J	MGP_DBA2J_G0002578	antisense lncRNA gene	Chr1:31366128-31371435 (-)
FVB/NJ	MGP_FVBNJ_G0002598	antisense lncRNA gene	Chr1:30915724-30920945 (-)
LP/J	MGP_LPJ_G0002658	antisense lncRNA gene	Chr1:33166122-33171029 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0002589	antisense lncRNA gene	Chr1:37525481-37530681 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0002767	antisense lncRNA gene	Chr1:32417730-32422927 (-)
PWK/PhJ	MGP_PWKPhJ_G0002508	antisense lncRNA gene	Chr1:31096926-31102191 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0002462	antisense lncRNA gene	Chr1:32393481-32398654 (-)
WSB/EiJ	MGP_WSBEiJ_G0002580	antisense lncRNA gene	Chr1:32402641-32408052 (-)

Homology

• Gene Tree
  Gm28306
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  5
• Chemically induced (other)
  1
• Gene trapped
  4
• Genomic Mutations
  1 involving Gm28306
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000101711 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000101711	Ensembl Gene Model | MGI Sequence Detail	5220	C57BL/6J
transcript	ENSMUST00000191315	Ensembl | MGI Sequence Detail	529	Not Applicable

References

• Summaries
  All 5

  Phenotypes 3
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008;