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Gm28209 Gene Detail
Summary
  • Symbol
    Gm28209
  • Name
    predicted gene 28209
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5578915
    NCBI Gene: 102636940
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:119830860-119834627 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 1, Syntenic
Strain
Comparison
more
  • SNPs within 2kb
    25 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5578915
lncRNA gene Chr1:119830320-119846243 (+)
129S1/SvImJ MGP_129S1SvImJ_G0004947
lincRNA gene Chr1:122677542-122681275 (+)
A/J MGP_AJ_G0004929
lincRNA gene Chr1:118279913-118283613 (+)
AKR/J MGP_AKRJ_G0004906
lincRNA gene Chr1:121767126-121770809 (+)
BALB/cJ MGP_BALBcJ_G0004910
lincRNA gene Chr1:118540687-118544366 (+)
C3H/HeJ MGP_C3HHeJ_G0004859
lincRNA gene Chr1:121926166-121934241 (+)
C57BL/6NJ MGP_C57BL6NJ_G0005061
lincRNA gene Chr1:127349471-127355990 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0004478
lincRNA gene Chr1:111930431-111935070 (+)
CAST/EiJ MGP_CASTEiJ_G0004808
lincRNA gene Chr1:120711992-120715975 (+)
CBA/J MGP_CBAJ_G0004851
lincRNA gene Chr1:131757143-131763704 (+)
DBA/2J MGP_DBA2J_G0004870
lincRNA gene Chr1:117302030-117306416 (+)
FVB/NJ MGP_FVBNJ_G0004889
lincRNA gene Chr1:116052805-116056940 (+)
LP/J MGP_LPJ_G0004948
lincRNA gene Chr1:124017367-124023786 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0004874
lincRNA gene Chr1:137511937-137515610 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0005065
lincRNA gene Chr1:121476480-121480164 (+)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0004685
lincRNA gene Chr1:120364703-120372446 (+)
WSB/EiJ MGP_WSBEiJ_G0004855
lincRNA gene Chr1:121359567-121364772 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Genomic Mutations
    3 involving Gm28209
  • Find Mice (IMSR)
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000101224 Ensembl Gene Model | MGI Sequence Detail 3768 C57BL/6J ±  kb
transcript ENSMUST00000187956 Ensembl | MGI Sequence Detail 775 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 8
    Phenotypes 4
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
03/19/2024
MGI 6.23
The Jackson Laboratory