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Gm28166 Gene Detail
Summary
  • Symbol
    Gm28166
  • Name
    predicted gene 28166
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5578872
    NCBI Gene: 105243516
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:100450322-100451912 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, Syntenic
Strain
Comparison
more
  • SNPs within 2kb
    86 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5578872
lncRNA gene Chr9:100449959-100453026 (+)
129S1/SvImJ MGP_129S1SvImJ_G0007494
lincRNA gene Chr9:101884899-101886489 (+)
A/J MGP_AJ_G0007489
lincRNA gene Chr9:98290297-98291875 (+)
AKR/J MGP_AKRJ_G0007461
lincRNA gene Chr9:100691400-100692980 (+)
BALB/cJ MGP_BALBcJ_G0007466
lincRNA gene Chr9:97972753-97974331 (+)
C3H/HeJ MGP_C3HHeJ_G0007411
lincRNA gene Chr9:101109529-101111107 (+)
C57BL/6NJ MGP_C57BL6NJ_G0007638
lincRNA gene Chr9:104806315-104807905 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0006819
lincRNA gene Chr9:95940154-95940653 (+)
CAST/EiJ MGP_CASTEiJ_G0007314
lincRNA gene Chr9:100892083-100893665 (+)
CBA/J MGP_CBAJ_G0007392
lincRNA gene Chr9:108425860-108427440 (+)
DBA/2J MGP_DBA2J_G0007418
lincRNA gene Chr9:97774010-97775588 (+)
FVB/NJ MGP_FVBNJ_G0007434
lincRNA gene Chr9:96585811-96587391 (+)
LP/J MGP_LPJ_G0007498
lincRNA gene Chr9:102114133-102115723 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0007415
lincRNA gene Chr9:110306741-110308319 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0007643
lincRNA gene Chr9:100942515-100944102 (+)
PWK/PhJ MGP_PWKPhJ_G0007255
lincRNA gene Chr9:97998294-97999886 (+)
SPRET/EiJ MGP_SPRETEiJ_G0007159
lincRNA gene Chr9:100997021-100998609 (+)
WSB/EiJ MGP_WSBEiJ_G0007374
lincRNA gene Chr9:100803863-100805443 (+)



Homology
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Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    2 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000101287 Ensembl Gene Model | MGI Sequence Detail 1591 C57BL/6J ±  kb
transcript ENSMUST00000187637 Ensembl | MGI Sequence Detail 620 Not Applicable  
For the selected sequence
Molecular
Reagents
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  • All nucleic 1
    cDNA 1
References
more
  • Summaries
    All 7
    Phenotypes 2
  • Earliest
    J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
  • Latest
    J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
07/29/2020
MGI 6.15
The Jackson Laboratory