Mir3084-2 Gene Detail

Summary

• Symbol
  Mir3084-2
• Name
  microRNA 3084-2
• Synonyms
  Gm38437, mmu-mir-3084-2

• Feature Type
  miRNA gene
• IDs
  MGI:5562754
  NCBI Gene: 102465114
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr19:60762767-60762835 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  20 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5562754	miRNA gene	Chr19:60762767-60762835 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Mir3084-2
  

Expression

• Other Mouse Links
  GEO
  Expression Atlas

Interactions

• Mir3084-2 interacts with 6544 markers (0610030E20Rik, 1110002L01Rik, 1110057P08Rik, ...) View All

Sequences &
Gene Models

• All Sequences
  5
• RefSeq
  1

• Ensembl
  ENSMUSG00000118735 (Evidence)
• NCBI Gene
  102465114

Representative Sequences			Length	Strain/Species
genomic	102465114	NCBI Gene Model | MGI Sequence Detail	69	C57BL/6J
transcript	NR_105743	RefSeq | MGI Sequence Detail	69	C57BL/6

Other Database
Links

• miRBase
  MI0020958

Other
Accession IDs

MGI:5621322

References

• Summaries
  All 5
• Earliest
  J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4

TSS for Mir3084-2:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr160066	Chr19:60764247-60764261 (-)	-1,419 bp