Mir3084-2 Gene Detail

Summary

• Symbol
  Mir3084-2
• Name
  microRNA 3084-2
• Synonyms
  Gm38437, mmu-mir-3084-2

• Feature Type
  miRNA gene
• IDs
  MGI:5562754
  NCBI Gene: 102465114
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr19:60774329-60774397 bp, - strand
• From miRBase annotation of GRCm38
  

  View this region in JBrowse
  
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  35 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5562754	miRNA gene	Chr19:60774329-60774397 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0008461	miRNA gene	Chr19:61375372-61375440 (-)
A/J	MGP_AJ_G0008449	miRNA gene	Chr19:58377530-58377598 (-)
AKR/J	MGP_AKRJ_G0008433	miRNA gene	Chr19:60198437-60198505 (-)
BALB/cJ	MGP_BALBcJ_G0008436	miRNA gene	Chr19:58459818-58459886 (-)
C3H/HeJ	MGP_C3HHeJ_G0008379	miRNA gene	Chr19:60441398-60441466 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0008639	miRNA gene	Chr19:62830253-62830321 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0007656	miRNA gene	Chr19:57211113-57211181 (-)
CAST/EiJ	MGP_CASTEiJ_G0008236	miRNA gene	Chr19:60546123-60546191 (-)
CBA/J	MGP_CBAJ_G0008344	miRNA gene	Chr19:65891697-65891765 (-)
DBA/2J	MGP_DBA2J_G0008379	miRNA gene	Chr19:58160207-58160275 (-)
FVB/NJ	MGP_FVBNJ_G0008400	miRNA gene	Chr19:57831346-57831414 (-)
LP/J	MGP_LPJ_G0008464	miRNA gene	Chr19:61214138-61214206 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0008364	miRNA gene	Chr19:65089026-65089094 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0008629	miRNA gene	Chr19:60443832-60443900 (-)
PWK/PhJ	MGP_PWKPhJ_G0008160	miRNA gene	Chr19:58105848-58105916 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0008033	miRNA gene	Chr19:59090594-59090662 (-)
WSB/EiJ	MGP_WSBEiJ_G0008320	miRNA gene	Chr19:60549529-60549597 (-)

Homology

• Gene Tree
  Mir3084-2
  

Expression

• Assay Results
  631

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Interactions

• Mir3084-2 interacts with 6545 markers (0610030E20Rik, 1110002L01Rik, 1110051M20Rik, ...) View All

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000105118 (Evidence)
• NCBI Gene
  102465114

Representative Sequences			Length	Strain/Species
genomic	102465114	NCBI Gene Model | MGI Sequence Detail	69	C57BL/6J
transcript	NR_105743	RefSeq | MGI Sequence Detail	69	C57BL/6

Other Database
Links

• miRBase
  MI0020958

Other
Accession IDs

MGI:5621322

References

• Summaries
  All 5
• Earliest
  J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4