Gm28053 Gene Detail

Summary

• Symbol
  Gm28053
• Name
  predicted gene, 28053

• Feature Type
  protein coding gene
• IDs
  MGI:5547789
• Alliance
  gene page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr6:48695541-48729578 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  199 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5547789	protein coding gene	Chr6:48695541-48729578 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0030708	protein coding gene	Chr6:47676026-47711414 (+)
A/J	MGP_AJ_G0030679	protein coding gene	Chr6:45510103-45545066 (+)
AKR/J	MGP_AKRJ_G0030604	protein coding gene	Chr6:47108938-47145886 (+)
BALB/cJ	MGP_BALBcJ_G0030689	protein coding gene	Chr6:45842229-45877336 (+)
C3H/HeJ	MGP_C3HHeJ_G0030402	protein coding gene	Chr6:47115895-47153931 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0031144	protein coding gene	Chr6:48795870-48833009 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0028352	protein coding gene	Chr6:43138342-43149743 (+)
CAST/EiJ	MGP_CASTEiJ_G0029806	protein coding gene	Chr6:46840090-46875022 (+)
CBA/J	MGP_CBAJ_G0030377	protein coding gene	Chr6:50818694-50854937 (+)
DBA/2J	MGP_DBA2J_G0030526	protein coding gene	Chr6:45426864-45460227 (+)
FVB/NJ	MGP_FVBNJ_G0030478	protein coding gene	Chr6:45060372-45093771 (+)
LP/J	MGP_LPJ_G0030611	protein coding gene	Chr6:47654393-47696326 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0030512	protein coding gene	Chr6:53629244-53666737 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0031173	protein coding gene	Chr6:46975122-47012633 (+)
PWK/PhJ	MGP_PWKPhJ_G0029519	protein coding gene	Chr6:44958348-44969626 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0029354	protein coding gene	Chr6:46321037-46357641 (+)
WSB/EiJ	MGP_WSBEiJ_G0029883	protein coding gene	Chr6:46977867-47012937 (+)

Homology

• Gene Tree
  Gm28053
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• UniProt
  1

• Ensembl
  ENSMUSG00000098715 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000098715	Ensembl Gene Model | MGI Sequence Detail	34038	C57BL/6J
transcript	ENSMUST00000204408	Ensembl | MGI Sequence Detail	351	Not Applicable
polypeptide	ENSMUSP00000145065	Ensembl | MGI Sequence Detail	40	Not Applicable

Protein
Information

• UniProt
  1 Sequence

References

• Summaries
  All 2
• Earliest
  J:53168 Bairoch A, et al., SWISS-PROT Annotated protein sequence database. Database Release. 1999;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm28053:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr56189	Chr6:48695536-48695547 (+)	1 bp
Tssr56196	Chr6:48702715-48702727 (+)	7,180 bp