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Rdh16f1 Gene Detail
Summary
  • Symbol
    Rdh16f1
  • Name
    RDH16 family member 1
  • Synonyms
    Gm28046
  • Feature Type
    protein coding gene
  • IDs
    MGI:5547782
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:127595656-127628563 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    141 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5547782
 protein coding gene Chr10:127595656-127628563 (+)
129S1/SvImJ MGP_129S1SvImJ_G0017836
 protein coding gene Chr10:131391557-131448952 (+)
A/J MGP_AJ_G0017813
 protein coding gene Chr10:126180975-126193942 (+)
AKR/J MGP_AKRJ_G0017774
 protein coding gene Chr10:129851715-129906755 (+)
BALB/cJ MGP_BALBcJ_G0017775
 protein coding gene Chr10:126533393-126566365 (+)
C3H/HeJ MGP_C3HHeJ_G0017601
 protein coding gene Chr10:130059074-130065205 (+)
C57BL/6NJ MGP_C57BL6NJ_G0018230
 protein coding gene Chr10:135838595-135876056 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0015911
 protein coding gene Chr10:120203677-120216208 (+)
CAST/EiJ MGP_CASTEiJ_G0017160
 protein coding gene Chr10:130749104-130765308 (+)
CBA/J MGP_CBAJ_G0017568
 protein coding gene Chr10:141327444-141372711 (+)
DBA/2J MGP_DBA2J_G0017674
 protein coding gene Chr10:125207185-125240853 (+)
FVB/NJ MGP_FVBNJ_G0017669
 protein coding gene Chr10:124152161-124185096 (+)
LP/J MGP_LPJ_G0017750
 protein coding gene Chr10:132036147-132042534 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0017698
 protein coding gene Chr10:144019015-144029406 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0018270
 protein coding gene Chr10:129932568-129969888 (+)
PWK/PhJ MGP_PWKPhJ_G0016946
 protein coding gene Chr10:125486261-125494695 (+)
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    20
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000099009 Ensembl Gene Model | MGI Sequence Detail 32908 C57BL/6J ±  kb
transcript ENSMUST00000128247 Ensembl | MGI Sequence Detail 2766 Not Applicable  
polypeptide ENSMUSP00000116574 Ensembl | MGI Sequence Detail 317 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR036291 NAD(P)-binding domain superfamily
    IPR020904 Short-chain dehydrogenase/reductase, conserved site
    IPR002347 Short-chain dehydrogenase/reductase SDR
References
more
  • Summaries
    All 3
  • Earliest
    J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
  • Latest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory