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Mir6240 Gene Detail
Summary
  • Symbol
    Mir6240
  • Name
    microRNA 6240
  • Synonyms
    mmu-mir-6240
Location &
Maps
more
  • Sequence Map
    Chr5:114990009-114990125 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    94 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5531232
 miRNA gene Chr5:114990009-114990125 (+)
129S1/SvImJ ENSMUSG00200023602
 miRNA gene Chr5:108731586-108731702 (+)
A/J ENSMUSG00195040350
 miRNA gene Chr5:108244394-108244510 (+)
AKR/J ENSMUSG00220052146
 miRNA gene Chr5:107760928-107761044 (+)
BALB/cJ ENSMUSG00180048748
 miRNA gene Chr5:108382257-108382373 (+)
C3H/HeJ ENSMUSG00175048699
 miRNA gene Chr5:110370342-110370458 (+)
C57BL/6NJ ENSMUSG00215036967
 miRNA gene Chr5:108390845-108390961 (+)
CAROLI/EiJ no annotation
CAST/EiJ ENSTCUG00005032589
 miRNA gene Chr5:107569329-107569445 (+)
CBA/J ENSMUSG00210044630
 miRNA gene Chr5:109122381-109122497 (+)
DBA/2J ENSMUSG00185055407
 miRNA gene Chr5:112173547-112173663 (+)
FVB/NJ ENSMUSG00205052342
 miRNA gene Chr5:108020657-108020773 (+)
JF1/MsJ ENSUMUG00000053770
 miRNA gene Chr5:115003053-115003169 (+)
LP/J ENSMUSG00230049063
 miRNA gene Chr5:116269749-116269865 (+)
NOD/ShiLtJ ENSMUSG00190050599
 miRNA gene Chr5:108058783-108058899 (+)
NZO/HlLtJ ENSMUSG00225018029
 miRNA gene Chr5:123922980-123923096 (+)
PWK/PhJ ENSLUMG00010040864
 miRNA gene Chr5:106906915-106907031 (+)
SPRET/EiJ ENSMSPG00010048004
 miRNA gene Chr5:110190644-110190750 (+)
WSB/EiJ ENSIUOG00005046652
 miRNA gene Chr5:110762601-110762717 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Mir6240
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    607
  • Tissues
    9
  • Literature Summary
    1
Sequences &
Gene Models
less
  • All Sequences
    22
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 102466620 NCBI Gene Model | MGI Sequence Detail 117 C57BL/6J ±  kb
transcript NR_105748 RefSeq | MGI Sequence Detail 117 ZRU/MplStud  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    Primer pair 1
Other Database
Links
less
miRBase MI0021587
References
more
  • Summaries
    All 12
    Developmental Gene Expression 1
    Phenotypes 5
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:379647 Ou F, et al., Complete stranded RNA profiling during early mouse gonad development. NAR Mol Med. 2025 Apr;2(2):ugaf014
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory