Mir6968 Gene Detail

Summary

• Symbol
  Mir6968
• Name
  microRNA 6968
• Synonyms
  mmu-mir-6968

• Feature Type
  miRNA gene
• IDs
  MGI:5531048
  NCBI Gene: 102465584
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:27154446-27154513 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  67 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5531048	miRNA gene	Chr17:27154446-27154513 (+)
129S1/SvImJ	ENSMUSG00200053888	miRNA gene	Chr17:22600339-22600406 (+)
A/J	ENSMUSG00195054374	miRNA gene	Chr17:23621049-23621116 (+)
AKR/J	ENSMUSG00220054013	miRNA gene	Chr17:22668313-22668380 (+)
BALB/cJ	ENSMUSG00180051337	miRNA gene	Chr17:22898493-22898560 (+)
C3H/HeJ	ENSMUSG00175054014	miRNA gene	Chr17:22656957-22657024 (+)
C57BL/6NJ	ENSMUSG00215054249	miRNA gene	Chr17:22664891-22664958 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0007542	miRNA gene	Chr17:22776787-22776853 (+)
CAST/EiJ	ENSTCUG00005050864	miRNA gene	Chr17:23265713-23265780 (+)
CBA/J	ENSMUSG00210050854	miRNA gene	Chr17:22495767-22495834 (+)
DBA/2J	ENSMUSG00185054231	miRNA gene	Chr17:24709230-24709297 (+)
FVB/NJ	ENSMUSG00205053823	miRNA gene	Chr17:22971673-22971740 (+)
JF1/MsJ	ENSUMUG00000057478	miRNA gene	Chr17:24169247-24169314 (+)
LP/J	ENSMUSG00230055077	miRNA gene	Chr17:26104832-26104899 (+)
NOD/ShiLtJ	ENSMUSG00190054378	miRNA gene	Chr17:22601887-22601954 (+)
NZO/HlLtJ	ENSMUSG00225054388	miRNA gene	Chr17:28034849-28034916 (+)
PWK/PhJ	ENSLUMG00010053501	miRNA gene	Chr17:22082156-22082223 (+)
SPRET/EiJ	ENSMSPG00010049985	miRNA gene	Chr17:23411523-23411591 (+)
WSB/EiJ	ENSIUOG00005051682	miRNA gene	Chr17:23360259-23360326 (+)

Homology

• Gene Tree
  Mir6968
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  2
• Radiation induced
  2
• Genomic Mutations
  2 involving Mir6968
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000098510 (Evidence)
• NCBI Gene
  102465584

Representative Sequences			Length	Strain/Species
genomic	102465584	NCBI Gene Model | MGI Sequence Detail	68	C57BL/6J
transcript	NR_105934	RefSeq | MGI Sequence Detail	68	ZRU/MplStud

Other Database
Links

miRBase

MI0022816

References

• Summaries
  All 8

  Phenotypes 3
• Earliest
  J:86784 Bergstrom DE, et al., Overlapping deletions spanning the proximal two-thirds of the mouse t complex. Mamm Genome. 2003 Dec;14(12):817-29
• Latest
  J:194116 Flachs P, et al., Interallelic and intergenic incompatibilities of the Prdm9 (Hst1) gene in mouse hybrid sterility. PLoS Genet. 2012;8(11):e1003044