Mir8094 Gene Detail

Summary

• Symbol
  Mir8094
• Name
  microRNA 8094
• Synonyms
  mmu-mir-8094

• Feature Type
  miRNA gene
• IDs
  MGI:5530895
  NCBI Gene: 102465886
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr17:35470265-35470381 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• Strain Annotations
  21

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5530895	miRNA gene	Chr17:35470265-35470381 (+)
129S1/SvImJ	ENSMUSG00200051579	miRNA gene	Chr17:31174387-31174503 (+)
A/J	ENSMUSG00195049473	miRNA gene	Chr17:32233806-32233922 (+)
A/J	ENSMUSG00195047000	miRNA gene	Chr17:32076554-32076670 (+)
AKR/J	ENSMUSG00220052261	miRNA gene	Chr17:31103976-31104092 (+)
BALB/cJ	ENSMUSG00180047023	miRNA gene	Chr17:31603637-31603753 (+)
BALB/cJ	ENSMUSG00180043860	miRNA gene	Chr17:31446403-31446519 (+)
C3H/HeJ	ENSMUSG00175045869	miRNA gene	Chr17:30990086-30990202 (+)
C57BL/6NJ	ENSMUSG00215054068	miRNA gene	Chr17:31014627-31014743 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005052352	miRNA gene	Chr17:32033486-32033602 (+)
CBA/J	ENSMUSG00210052260	miRNA gene	Chr17:30812176-30812292 (+)
DBA/2J	ENSMUSG00185055062	miRNA gene	Chr17:33465610-33465726 (+)
DBA/2J	ENSMUSG00185055935	miRNA gene	Chr17:33622843-33622959 (+)
FVB/NJ	ENSMUSG00205053850	miRNA gene	Chr17:31332399-31332515 (+)
JF1/MsJ	ENSUMUG00000057362	miRNA gene	Chr17:32717784-32717900 (+)
LP/J	ENSMUSG00230054701	miRNA gene	Chr17:34572619-34572735 (+)
NOD/ShiLtJ	ENSMUSG00190053699	miRNA gene	Chr17:30933192-30933308 (+)
NZO/HlLtJ	ENSMUSG00225055015	miRNA gene	Chr17:36586245-36586361 (+)
PWK/PhJ	ENSLUMG00010045393	miRNA gene	Chr17:30551501-30551617 (+)
SPRET/EiJ	ENSMSPG00010050897	miRNA gene	Chr17:31735264-31735380 (+)
WSB/EiJ	ENSIUOG00005052214	miRNA gene	Chr17:31661876-31661992 (+)

Homology

• Gene Tree
  Mir8094
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Mir8094
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  1

• Ensembl
  ENSMUSG00000098269 (Evidence)
• NCBI Gene
  102465886

Representative Sequences			Length	Strain/Species
genomic	102465886	NCBI Gene Model | MGI Sequence Detail	117	C57BL/6J
transcript	NR_106169	RefSeq | MGI Sequence Detail	117	ZRU/MplStud

Other Database
Links

miRBase

MI0026021

References

• Summaries
  All 6

  Phenotypes 1
• Earliest
  J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4
• Latest
  J:190754 Ermakova O, et al., Construction and phenotypic analysis of mice carrying a duplication of the major histocompatibility class I (MHC-I) locus. Mamm Genome. 2012 Aug;23(7-8):443-53

TSS for Mir8094:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr144332	Chr17:35470190-35470213 (+)	-63 bp