Mir6904 Gene Detail

Summary

• Symbol
  Mir6904
• Name
  microRNA 6904
• Synonyms
  mmu-mir-6904

• Feature Type
  miRNA gene
• IDs
  MGI:5530808
  NCBI Gene: 102466761
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:180414766-180414832 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  125 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5530808	miRNA gene	Chr1:180414766-180414832 (+)
129S1/SvImJ	ENSMUSG00200023727	miRNA gene	Chr1:178166937-178167003 (+)
A/J	ENSMUSG00195043809	miRNA gene	Chr1:177786646-177786712 (+)
AKR/J	ENSMUSG00220020859	miRNA gene	Chr1:177023866-177023932 (+)
BALB/cJ	ENSMUSG00180037226	miRNA gene	Chr1:177818131-177818197 (+)
C3H/HeJ	ENSMUSG00175040428	miRNA gene	Chr1:177993964-177994030 (+)
C57BL/6NJ	ENSMUSG00215030663	miRNA gene	Chr1:177218806-177218872 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006995	miRNA gene	Chr1:170455089-170455155 (+)
CAST/EiJ	ENSTCUG00005043803	miRNA gene	Chr1:175741299-175741365 (+)
CBA/J	ENSMUSG00210019091	miRNA gene	Chr1:177660382-177660448 (+)
DBA/2J	ENSMUSG00185031251	miRNA gene	Chr1:182279810-182279876 (+)
FVB/NJ	ENSMUSG00205038590	miRNA gene	Chr1:176713667-176713733 (+)
JF1/MsJ	ENSUMUG00000024051	miRNA gene	Chr1:181256449-181256515 (+)
LP/J	ENSMUSG00230033198	miRNA gene	Chr1:181832797-181832863 (+)
NOD/ShiLtJ	ENSMUSG00190039164	miRNA gene	Chr1:177679812-177679878 (+)
NZO/HlLtJ	ENSMUSG00225011243	miRNA gene	Chr1:185591078-185591144 (+)
PWK/PhJ	ENSLUMG00010016752	miRNA gene	Chr1:176530737-176530803 (+)
SPRET/EiJ	ENSMSPG00010036163	miRNA gene	Chr1:179988633-179988699 (+)
WSB/EiJ	ENSIUOG00005011716	miRNA gene	Chr1:176896575-176896641 (+)

Homology

• Gene Tree
  Mir6904
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Mir6904
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000098926 (Evidence)
• NCBI Gene
  102466761

Representative Sequences			Length	Strain/Species
genomic	102466761	NCBI Gene Model | MGI Sequence Detail	67	C57BL/6J
transcript	NR_105869	RefSeq | MGI Sequence Detail	67	ZRU/MplStud

Other Database
Links

miRBase

MI0022751

References

• Summaries
  All 7

  Phenotypes 2
• Earliest
  J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4