Mir6546 Gene Detail

Summary

• Symbol
  Mir6546
• Name
  microRNA 6546
• Synonyms
  mmu-mir-6546

• Feature Type
  miRNA gene
• IDs
  MGI:5530790
  NCBI Gene: 102466998
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:170892160-170892221 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  72 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5530790	miRNA gene	Chr1:170892160-170892221 (-)
129S1/SvImJ	ENSMUSG00200048215	miRNA gene	Chr1:168381236-168381297 (-)
A/J	ENSMUSG00195048977	miRNA gene	Chr1:167698713-167698774 (-)
AKR/J	ENSMUSG00220032193	miRNA gene	Chr1:167384430-167384491 (-)
BALB/cJ	ENSMUSG00180046598	miRNA gene	Chr1:167960160-167960221 (-)
C3H/HeJ	ENSMUSG00175048910	miRNA gene	Chr1:168029227-168029288 (-)
C57BL/6NJ	ENSMUSG00215045087	miRNA gene	Chr1:167833503-167833564 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005046682	miRNA gene	Chr1:166340737-166340798 (-)
CBA/J	ENSMUSG00210044200	miRNA gene	Chr1:167919609-167919670 (-)
DBA/2J	ENSMUSG00185012140	miRNA gene	Chr1:172151742-172151803 (-)
FVB/NJ	ENSMUSG00205041761	miRNA gene	Chr1:166889936-166889997 (-)
JF1/MsJ	ENSUMUG00000012934	miRNA gene	Chr1:171284400-171284461 (-)
LP/J	ENSMUSG00230027146	miRNA gene	Chr1:171767956-171768017 (-)
NOD/ShiLtJ	ENSMUSG00190040996	miRNA gene	Chr1:167690504-167690565 (-)
NZO/HlLtJ	ENSMUSG00225005164	miRNA gene	Chr1:175374202-175374263 (-)
PWK/PhJ	ENSLUMG00010037085	miRNA gene	Chr1:166672943-166673004 (-)
SPRET/EiJ	ENSMSPG00010048811	miRNA gene	Chr1:170236860-170236921 (-)
WSB/EiJ	ENSIUOG00005039867	miRNA gene	Chr1:167092887-167092948 (-)

Homology

• Gene Tree
  Mir6546
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  26 phenotype references
  

• All Mutations and Alleles
  5
• Chemically induced (other)
  2
• Targeted
  2
• Genomic Mutations
  5 involving Mir6546
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000118979 (Evidence)
• NCBI Gene
  102466998

Representative Sequences			Length	Strain/Species
genomic	102466998	NCBI Gene Model | MGI Sequence Detail	62	C57BL/6J
transcript	NR_106103	RefSeq | MGI Sequence Detail	62	ZRU/MplStud

Other Database
Links

miRBase

MI0024983

References

• Summaries
  All 30

  Phenotypes 26
• Earliest
  J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4
• Latest
  J:389470 Cervantes Rincon T, et al., Analysis of West Nile disease convalescents identifies human monoclonal antibodies protective against West Nile and related orthoflaviviruses. Immunity. 2026 Jun 22;