Mir6382 Gene Detail

Summary

• Symbol
  Mir6382
• Name
  microRNA 6382
• Synonyms
  mmu-mir-6382

• Feature Type
  miRNA gene
• IDs
  MGI:5530701
  NCBI Gene: 102465963
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:105353432-105353541 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  126 from dbSNP Build 142
• Strain Annotations
  33

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5530701	miRNA gene	ChrX:105353432-105353541 (+)
129S1/SvImJ	ENSMUSG00200039152	miRNA gene	ChrX:87136779-87136888 (+)
129S1/SvImJ	ENSMUSG00200039861	miRNA gene	ChrX:87066199-87066306 (+)
A/J	ENSMUSG00195043793	miRNA gene	ChrX:90796595-90796702 (+)
A/J	ENSMUSG00195040340	miRNA gene	ChrX:90867145-90867254 (+)
AKR/J	ENSMUSG00220040543	miRNA gene	ChrX:85572165-85572274 (+)
AKR/J	ENSMUSG00220042095	miRNA gene	ChrX:85501630-85501737 (+)
BALB/cJ	ENSMUSG00180043786	miRNA gene	ChrX:87533270-87533379 (+)
BALB/cJ	ENSMUSG00180045516	miRNA gene	ChrX:87462710-87462817 (+)
C3H/HeJ	ENSMUSG00175044048	miRNA gene	ChrX:91109116-91109225 (+)
C3H/HeJ	ENSMUSG00175047894	miRNA gene	ChrX:91038564-91038671 (+)
C57BL/6NJ	ENSMUSG00215047940	miRNA gene	ChrX:87692043-87692150 (+)
C57BL/6NJ	ENSMUSG00215046706	miRNA gene	ChrX:87762596-87762705 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005042461	miRNA gene	ChrX:88558825-88558934 (+)
CBA/J	ENSMUSG00210047146	miRNA gene	ChrX:87932169-87932276 (+)
CBA/J	ENSMUSG00210046405	miRNA gene	ChrX:88002721-88002830 (+)
DBA/2J	ENSMUSG00185045494	miRNA gene	ChrX:100457136-100457245 (+)
DBA/2J	ENSMUSG00185046955	miRNA gene	ChrX:100386614-100386721 (+)
FVB/NJ	ENSMUSG00205042285	miRNA gene	ChrX:87008524-87008631 (+)
FVB/NJ	ENSMUSG00205042131	miRNA gene	ChrX:87079073-87079182 (+)
JF1/MsJ	ENSUMUG00000042579	miRNA gene	ChrX:121067056-121067165 (+)
JF1/MsJ	ENSUMUG00000045662	miRNA gene	ChrX:120994603-120994710 (+)
LP/J	ENSMUSG00230044254	miRNA gene	ChrX:107063577-107063684 (+)
LP/J	ENSMUSG00230043703	miRNA gene	ChrX:107134129-107134238 (+)
NOD/ShiLtJ	ENSMUSG00190044636	miRNA gene	ChrX:87193545-87193654 (+)
NOD/ShiLtJ	ENSMUSG00190045388	miRNA gene	ChrX:87123031-87123138 (+)
NZO/HlLtJ	ENSMUSG00225040916	miRNA gene	ChrX:112204291-112204398 (+)
NZO/HlLtJ	ENSMUSG00225040687	miRNA gene	ChrX:112280983-112281092 (+)
PWK/PhJ	ENSLUMG00010041402	miRNA gene	ChrX:86251523-86251630 (+)
PWK/PhJ	ENSLUMG00010037829	miRNA gene	ChrX:86330804-86330913 (+)
SPRET/EiJ	ENSMSPG00010041559	miRNA gene	ChrX:90604620-90604727 (+)
WSB/EiJ	ENSIUOG00005045980	miRNA gene	ChrX:87633411-87633518 (+)
WSB/EiJ	ENSIUOG00005043275	miRNA gene	ChrX:87710481-87710590 (+)

Homology

• Gene Tree
  Mir6382
  

Sequences &
Gene Models

• All Sequences
  37
• RefSeq
  1

• Ensembl
  ENSMUSG00000119174 (Evidence)
• NCBI Gene
  102465963

Representative Sequences			Length	Strain/Species
genomic	102465963	NCBI Gene Model | MGI Sequence Detail	110	C57BL/6J
transcript	NR_105803	RefSeq | MGI Sequence Detail	110	ZRU/MplStud

Other Database
Links

miRBase

MI0021913

References

• Summaries
  All 4
• Earliest
  J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4