Mir6923 Gene Detail

Summary

• Symbol
  Mir6923
• Name
  microRNA 6923
• Synonyms
  mmu-mir-6923

• Feature Type
  miRNA gene
• IDs
  MGI:5530694
  NCBI Gene: 102466766
• Alliance
  gene page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr11:66990630-66990701 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  54 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5530694	miRNA gene	Chr11:66990630-66990701 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0007820	miRNA gene	Chr11:67380506-67380577 (+)
A/J	MGP_AJ_G0007816	miRNA gene	Chr11:64856425-64856496 (+)
AKR/J	MGP_AKRJ_G0007790	miRNA gene	Chr11:66797366-66797437 (+)
BALB/cJ	MGP_BALBcJ_G0007793	miRNA gene	Chr11:65140561-65140632 (+)
C3H/HeJ	MGP_C3HHeJ_G0007740	miRNA gene	Chr11:66808450-66808521 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0007971	miRNA gene	Chr11:69413639-69413710 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0007116	miRNA gene	Chr11:61817992-61818064 (+)
CAST/EiJ	MGP_CASTEiJ_G0007633	miRNA gene	Chr11:67031202-67031273 (+)
CBA/J	MGP_CBAJ_G0007711	miRNA gene	Chr11:72460454-72460525 (+)
DBA/2J	MGP_DBA2J_G0007747	miRNA gene	Chr11:64401450-64401521 (+)
FVB/NJ	MGP_FVBNJ_G0007764	miRNA gene	Chr11:64065365-64065436 (+)
LP/J	MGP_LPJ_G0007824	miRNA gene	Chr11:67934852-67934923 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0007734	miRNA gene	Chr11:73288241-73288312 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007969	miRNA gene	Chr11:67029087-67029158 (+)
PWK/PhJ	MGP_PWKPhJ_G0007562	miRNA gene	Chr11:65060846-65060917 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0007458	miRNA gene	Chr11:66855414-66855485 (+)
WSB/EiJ	MGP_WSBEiJ_G0007701	miRNA gene	Chr11:66646993-66647064 (+)

Homology

• Gene Tree
  Mir6923
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Mir6923
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  672

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000098855 (Evidence)
• NCBI Gene
  102466766

Representative Sequences			Length	Strain/Species
genomic	102466766	NCBI Gene Model | MGI Sequence Detail	72	C57BL/6J
transcript	NR_105888	RefSeq | MGI Sequence Detail	72	C57BL/6

Other Database
Links

miRBase

MI0022770

References

• Summaries
  All 7

  Phenotypes 3
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4

TSS for Mir6923:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr102156	Chr11:66988720-66988774 (+)	-1,883 bp
Tssr102157	Chr11:66989394-66989407 (+)	-1,229 bp