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Gm27227 Gene Detail
Summary
  • Symbol
    Gm27227
  • Name
    predicted gene 27227
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5521070
    NCBI Gene: 102638853
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:80263306-80265450 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, Syntenic
Strain
Comparison
more
  • SNPs within 2kb
    101 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5521070
lncRNA gene Chr9:80262958-80265468 (-)
129S1/SvImJ MGP_129S1SvImJ_G0004653
antisense lncRNA gene Chr9:80848589-80850742 (-)
A/J MGP_AJ_G0004634
antisense lncRNA gene Chr9:78059237-78061363 (-)
AKR/J MGP_AKRJ_G0004617
antisense lncRNA gene Chr9:79900004-79902130 (-)
BALB/cJ MGP_BALBcJ_G0004618
antisense lncRNA gene Chr9:77690170-77692296 (-)
C3H/HeJ MGP_C3HHeJ_G0004567
antisense lncRNA gene Chr9:80417427-80419553 (-)
C57BL/6NJ MGP_C57BL6NJ_G0004768
antisense lncRNA gene Chr9:83022756-83024900 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0004218
antisense lncRNA gene Chr9:77193332-77195406 (-)
CAST/EiJ MGP_CASTEiJ_G0004523
antisense lncRNA gene Chr9:80763567-80765742 (-)
CBA/J MGP_CBAJ_G0004561
antisense lncRNA gene Chr9:85990183-85992309 (-)
DBA/2J MGP_DBA2J_G0004576
antisense lncRNA gene Chr9:77671233-77673359 (-)
FVB/NJ MGP_FVBNJ_G0004594
antisense lncRNA gene Chr9:76884076-76886202 (-)
LP/J MGP_LPJ_G0004657
antisense lncRNA gene Chr9:81087313-81089466 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0004582
antisense lncRNA gene Chr9:87210476-87212602 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0004767
antisense lncRNA gene Chr9:80121054-80123180 (-)
PWK/PhJ MGP_PWKPhJ_G0004477
antisense lncRNA gene Chr9:77872323-77874506 (-)
SPRET/EiJ MGP_SPRETEiJ_G0004417
antisense lncRNA gene Chr9:80253116-80255200 (-)
WSB/EiJ MGP_WSBEiJ_G0004566
antisense lncRNA gene Chr9:80042445-80044589 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Gm27227
  • Find Mice (IMSR)
Expression
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000099016 Ensembl Gene Model | MGI Sequence Detail 2145 C57BL/6J ±  kb
transcript ENSMUST00000183413 Ensembl | MGI Sequence Detail 633 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 11
    Phenotypes 7
  • Earliest
    J:12013 Russell LB, Definition of functional units in a small chromosomal segment of the mouse and its use in interpreting the nature of radiation-induced mutations. Mutat Res. 1971 Jan;11(1):107-23
  • Latest
    J:29898 Avraham KB, et al., The mouse Snell's waltzer deafness gene encodes an unconventional myosin required for structural integrity of inner ear hair cells. Nat Genet. 1995 Dec;11(4):369-75

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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Funding Information
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last database update
12/03/2019
MGI 6.14
The Jackson Laboratory