Gm26944 Gene Detail

Summary

• Symbol
  Gm26944
• Name
  predicted gene, 26944

• Feature Type
  lncRNA gene
• IDs
  MGI:5504059
  NCBI Gene: 102635071
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr7:92288947-92296650 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  75 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5504059	lncRNA gene	Chr7:92286388-92299235 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0007234	lincRNA gene	Chr7:95192317-95199830 (+)
A/J	MGP_AJ_G0007231	lincRNA gene	Chr7:92818608-92826221 (+)
AKR/J	MGP_AKRJ_G0007201	lincRNA gene	Chr7:95032093-95039706 (+)
BALB/cJ	MGP_BALBcJ_G0007209	lincRNA gene	Chr7:92495285-92502898 (+)
C3H/HeJ	MGP_C3HHeJ_G0007153	lincRNA gene	Chr7:95400758-95408255 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0007379	lincRNA gene	Chr7:98872221-98879734 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006585	lincRNA gene	Chr7:95610496-95617886 (+)
CAST/EiJ	MGP_CASTEiJ_G0007055	lincRNA gene	Chr7:86886335-86893826 (+)
CBA/J	MGP_CBAJ_G0007136	lincRNA gene	Chr7:102203750-102211247 (+)
DBA/2J	MGP_DBA2J_G0007157	lincRNA gene	Chr7:91252278-91259775 (+)
FVB/NJ	MGP_FVBNJ_G0007180	lincRNA gene	Chr7:91084236-91091849 (+)
LP/J	MGP_LPJ_G0007239	lincRNA gene	Chr7:96440454-96447951 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0007156	lincRNA gene	Chr7:103329494-103337107 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007382	lincRNA gene	Chr7:94343207-94350704 (+)
PWK/PhJ	MGP_PWKPhJ_G0006998	lincRNA gene	Chr7:84321789-84329213 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0006906	lincRNA gene	Chr7:81652568-81660010 (+)
WSB/EiJ	MGP_WSBEiJ_G0007116	lincRNA gene	Chr7:94998193-95005690 (+)

Homology

• Gene Tree
  Gm26944
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  25 phenotype references
  

• All Mutations and Alleles
  9
• Chemically induced (other)
  1
• Gene trapped
  6
• Radiation induced
  2
• Genomic Mutations
  3 involving Gm26944
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  26
• RefSeq
  4

• Ensembl
  ENSMUSG00000098066 (Evidence)
• NCBI Gene
  102635071

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000098066	Ensembl Gene Model | MGI Sequence Detail	7704	C57BL/6J
transcript	ENSMUST00000182265	Ensembl | MGI Sequence Detail	633	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 29

  Phenotypes 25
• Earliest
  J:141526 Russell LB, et al., Analysis of the albino-locus region of the mouse. III. Time of death of prenatal lethals. Genetics. 1979 May;92(1):205-13
• Latest
  J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

TSS for Gm26944:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr67863	Chr7:92287507-92287510 (+)	-1,438 bp