Gm26805 Gene Detail

Summary

• Symbol
  Gm26805
• Name
  predicted gene, 26805

• Feature Type
  lncRNA gene
• IDs
  MGI:5477299
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:37904380-37910469 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  62 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5477299	lncRNA gene	Chr1:37904380-37910469 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0002664	antisense lncRNA gene	Chr1:36513741-36519858 (+)
A/J	MGP_AJ_G0002640	antisense lncRNA gene	Chr1:35507075-35513203 (+)
AKR/J	MGP_AKRJ_G0002620	antisense lncRNA gene	Chr1:35998090-36004186 (+)
BALB/cJ	MGP_BALBcJ_G0002626	antisense lncRNA gene	Chr1:35157261-35164901 (+)
C3H/HeJ	MGP_C3HHeJ_G0002586	antisense lncRNA gene	Chr1:36222172-36229909 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0002770	antisense lncRNA gene	Chr1:38097991-38105263 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002317	antisense lncRNA gene	Chr1:32498559-32504707 (+)
CAST/EiJ	MGP_CASTEiJ_G0002559	antisense lncRNA gene	Chr1:36083945-36090371 (+)
CBA/J	MGP_CBAJ_G0002581	antisense lncRNA gene	Chr1:39152914-39160993 (+)
DBA/2J	MGP_DBA2J_G0002586	antisense lncRNA gene	Chr1:34812668-34819098 (+)
FVB/NJ	MGP_FVBNJ_G0002606	antisense lncRNA gene	Chr1:34344304-34350286 (+)
LP/J	MGP_LPJ_G0002666	antisense lncRNA gene	Chr1:36860765-36868158 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0002597	antisense lncRNA gene	Chr1:41307558-41314356 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0002775	antisense lncRNA gene	Chr1:36066896-36072993 (+)
PWK/PhJ	MGP_PWKPhJ_G0002516	antisense lncRNA gene	Chr1:34585049-34591149 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0002470	antisense lncRNA gene	Chr1:36014887-36021026 (+)
WSB/EiJ	MGP_WSBEiJ_G0002588	antisense lncRNA gene	Chr1:36023936-36030032 (+)

Homology

• Gene Tree
  Gm26805
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Gene trapped
  1
• Genomic Mutations
  1 involving Gm26805
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000097268 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000097268	Ensembl Gene Model | MGI Sequence Detail	6090	C57BL/6J
transcript	ENSMUST00000181885	Ensembl | MGI Sequence Detail	3089	Not Applicable

References

• Summaries
  All 4

  Phenotypes 3
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008;