Gm26621 Gene Detail

Summary

• Symbol
  Gm26621
• Name
  predicted gene, 26621

• Feature Type
  lncRNA gene
• IDs
  MGI:5477115
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr15:68206564-68209279 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  23 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5477115	lncRNA gene	Chr15:68206564-68209279 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0015299	unclassified non-coding RNA gene	Chr15:67900232-67902947 (-)
A/J	MGP_AJ_G0015274	unclassified non-coding RNA gene	Chr15:65340900-65343615 (-)
AKR/J	MGP_AKRJ_G0015237	unclassified non-coding RNA gene	Chr15:67136792-67139508 (-)
BALB/cJ	MGP_BALBcJ_G0015238	unclassified non-coding RNA gene	Chr15:65496644-65499358 (-)
C3H/HeJ	MGP_C3HHeJ_G0015061	unclassified non-coding RNA gene	Chr15:67245352-67248066 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0015692	unclassified non-coding RNA gene	Chr15:70476052-70478767 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013433	unclassified non-coding RNA gene	Chr15:62067321-62070554 (-)
CAST/EiJ	MGP_CASTEiJ_G0014612	unclassified non-coding RNA gene	Chr15:67943394-67946107 (-)
CBA/J	MGP_CBAJ_G0015041	unclassified non-coding RNA gene	Chr15:72814467-72817181 (-)
DBA/2J	MGP_DBA2J_G0015135	unclassified non-coding RNA gene	Chr15:65103537-65106253 (-)
FVB/NJ	MGP_FVBNJ_G0015143	unclassified non-coding RNA gene	Chr15:64125860-64128575 (-)
LP/J	MGP_LPJ_G0015215	unclassified non-coding RNA gene	Chr15:67823145-67825861 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015168	unclassified non-coding RNA gene	Chr15:77944064-77946780 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015731	unclassified non-coding RNA gene	Chr15:67529360-67532076 (-)
PWK/PhJ	MGP_PWKPhJ_G0014403	unclassified non-coding RNA gene	Chr15:65192587-65195438 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0014191	unclassified non-coding RNA gene	Chr15:67341064-67343757 (-)
WSB/EiJ	MGP_WSBEiJ_G0014720	unclassified non-coding RNA gene	Chr15:67485891-67488606 (-)

Homology

• Gene Tree
  Gm26621
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  20 phenotype references
  

• All Mutations and Alleles
  4
• Chemically induced (other)
  3
• Radiation induced
  1
• Genomic Mutations
  4 involving Gm26621
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000096967 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000096967	Ensembl Gene Model | MGI Sequence Detail	2716	C57BL/6J
transcript	ENSMUST00000194661	Ensembl | MGI Sequence Detail	2716	Not Applicable

References

• Summaries
  All 21

  Phenotypes 20
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:285676 Suzuki A, et al., Genes and microRNAs associated with mouse cleft palate: A systematic review and bioinformatics analysis. Mech Dev. 2018 Apr;150:21-27

TSS for Gm26621:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr134628	Chr15:68209276-68209281 (-)	0 bp