Gm26513 Gene Detail

Summary

• Symbol
  Gm26513
• Name
  predicted gene, 26513

• Feature Type
  lncRNA gene
• IDs
  MGI:5477007
  NCBI Gene: 108168225
• Alliance
  gene page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr15:97991164-97993652 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  7 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5477007	lncRNA gene	Chr15:97991164-97993652 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003305	antisense lncRNA gene	Chr15:99785024-99787512 (+)
A/J	MGP_AJ_G0003281	antisense lncRNA gene	Chr15:95836288-95838776 (+)
AKR/J	MGP_AKRJ_G0003264	antisense lncRNA gene	Chr15:98729713-98732201 (+)
BALB/cJ	MGP_BALBcJ_G0003270	antisense lncRNA gene	Chr15:96060940-96063428 (+)
C3H/HeJ	MGP_C3HHeJ_G0003223	antisense lncRNA gene	Chr15:98801983-98804471 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003412	antisense lncRNA gene	Chr15:103468167-103470655 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002934	antisense lncRNA gene	Chr15:91786406-91788853 (+)
CAST/EiJ	MGP_CASTEiJ_G0003189	antisense lncRNA gene	Chr15:99684210-99686698 (+)
CBA/J	MGP_CBAJ_G0003220	antisense lncRNA gene	Chr15:106930108-106932596 (+)
DBA/2J	MGP_DBA2J_G0003225	antisense lncRNA gene	Chr15:95287115-95289603 (+)
FVB/NJ	MGP_FVBNJ_G0003244	antisense lncRNA gene	Chr15:94275934-94278422 (+)
LP/J	MGP_LPJ_G0003298	antisense lncRNA gene	Chr15:99898497-99900985 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003233	antisense lncRNA gene	Chr15:111042517-111045005 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003414	antisense lncRNA gene	Chr15:98879744-98882232 (+)
PWK/PhJ	MGP_PWKPhJ_G0003147	antisense lncRNA gene	Chr15:95394581-95397069 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0003093	antisense lncRNA gene	Chr15:98663418-98665896 (+)
WSB/EiJ	MGP_WSBEiJ_G0003223	antisense lncRNA gene	Chr15:99397310-99399798 (+)

Homology

• Gene Tree
  Gm26513
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  17 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm26513
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000097150 (Evidence)
• NCBI Gene
  108168225

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000097150	Ensembl Gene Model | MGI Sequence Detail	2489	C57BL/6J
transcript	ENSMUST00000181802	Ensembl | MGI Sequence Detail	2489	Not Applicable

References

• Summaries
  All 19

  Phenotypes 17
• Earliest
  J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
• Latest
  J:285676 Suzuki A, et al., Genes and microRNAs associated with mouse cleft palate: A systematic review and bioinformatics analysis. Mech Dev. 2018 Apr;150:21-27

TSS for Gm26513:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr132914	Chr15:97991299-97991395 (+)	183 bp
Tssr132915	Chr15:97991551-97991562 (+)	393 bp