Gm26457 Gene Detail

Summary

• Symbol
  Gm26457
• Name
  predicted gene, 26457

• Feature Type
  snoRNA gene
• IDs
  MGI:5456234
  NCBI Gene: 115487641
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr1:63217836-63217913 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  15 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5456234	snoRNA gene	Chr1:63217836-63217913 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0038408	snoRNA gene	Chr1:63321411-63321488 (+)
A/J	MGP_AJ_G0038399	snoRNA gene	Chr1:61078340-61078417 (+)
AKR/J	MGP_AKRJ_G0038336	snoRNA gene	Chr1:62759378-62759455 (+)
BALB/cJ	MGP_BALBcJ_G0038385	snoRNA gene	Chr1:61165226-61165303 (+)
C3H/HeJ	MGP_C3HHeJ_G0038048	snoRNA gene	Chr1:63038051-63038128 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0038923	snoRNA gene	Chr1:65754815-65754892 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035708	snoRNA gene	Chr1:57195974-57196051 (+)
CAST/EiJ	MGP_CASTEiJ_G0037194	snoRNA gene	Chr1:62302997-62303074 (+)
CBA/J	MGP_CBAJ_G0038020	snoRNA gene	Chr1:67856924-67857001 (+)
DBA/2J	MGP_DBA2J_G0038211	snoRNA gene	Chr1:60493394-60493471 (+)
FVB/NJ	MGP_FVBNJ_G0038161	snoRNA gene	Chr1:59785817-59785894 (+)
LP/J	MGP_LPJ_G0038250	snoRNA gene	Chr1:64206098-64206175 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038160	snoRNA gene	Chr1:70762325-70762402 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039032	snoRNA gene	Chr1:62743182-62743259 (+)
PWK/PhJ	MGP_PWKPhJ_G0036882	snoRNA gene	Chr1:59862848-59862925 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0036638	snoRNA gene	Chr1:62262466-62262543 (+)
WSB/EiJ	MGP_WSBEiJ_G0037424	snoRNA gene	Chr1:62466654-62466731 (+)

Expression

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000064612 (Evidence), ENSMUSG00002074855 (Evidence)
• NCBI Gene
  115487641

Representative Sequences			Length	Strain/Species
genomic	115487641	NCBI Gene Model | MGI Sequence Detail	78	C57BL/6J
transcript	XR_004936758	RefSeq | MGI Sequence Detail	78	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm26457:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr7059	Chr1:63217619-63217639 (+)	-207 bp