Gm25283 Gene Detail

Summary

• Symbol
  Gm25283
• Name
  predicted gene, 25283

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:5455060
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr6:47614077-47614153 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  8 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5455060	unclassified non-coding RNA gene	Chr6:47614077-47614153 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0009773	unclassified non-coding RNA gene	Chr6:46543313-46543389 (+)
A/J	MGP_AJ_G0009759	unclassified non-coding RNA gene	Chr6:44390181-44390257 (+)
AKR/J	MGP_AKRJ_G0009743	unclassified non-coding RNA gene	Chr6:45913371-45913447 (+)
BALB/cJ	MGP_BALBcJ_G0009742	unclassified non-coding RNA gene	Chr6:44737802-44737878 (+)
C3H/HeJ	MGP_C3HHeJ_G0009675	unclassified non-coding RNA gene	Chr6:45964485-45964561 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0009985	unclassified non-coding RNA gene	Chr6:47677305-47677381 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0008801	unclassified non-coding RNA gene	Chr6:42099474-42099551 (+)
CAST/EiJ	MGP_CASTEiJ_G0009249	unclassified non-coding RNA gene	Chr15:71860475-71860551 (+)
CBA/J	MGP_CBAJ_G0009648	unclassified non-coding RNA gene	Chr6:49571387-49571463 (+)
DBA/2J	MGP_DBA2J_G0009676	unclassified non-coding RNA gene	Chr6:44331215-44331291 (+)
FVB/NJ	MGP_FVBNJ_G0009692	unclassified non-coding RNA gene	Chr6:43970809-43970885 (+)
LP/J	MGP_LPJ_G0009769	unclassified non-coding RNA gene	Chr6:46442410-46442486 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0009661	unclassified non-coding RNA gene	Chr6:52453772-52453848 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0009958	unclassified non-coding RNA gene	Chr6:45852356-45852432 (+)
PWK/PhJ	MGP_PWKPhJ_G0009416	unclassified non-coding RNA gene	Chr6:43967161-43967237 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0009252	unclassified non-coding RNA gene	Chr6:45384122-45384198 (+)
WSB/EiJ	MGP_WSBEiJ_G0009595	unclassified non-coding RNA gene	Chr6:45831043-45831119 (+)

Homology

• Gene Tree
  Gm25283
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000087897 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000087897	Ensembl Gene Model | MGI Sequence Detail	77	C57BL/6J
transcript	ENSMUST00000157272	Ensembl | MGI Sequence Detail	77	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm25283:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr56096	Chr6:47613511-47613541 (+)	-551 bp