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Mir5617 Gene Detail
Summary
  • Symbol
    Mir5617
  • Name
    microRNA 5617
  • Synonyms
    mmu-mir-5617
Location &
Maps
more
  • Sequence Map
    ChrX:20729365-20729421 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    8 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5454969
 miRNA gene ChrX:20729365-20729421 (-)
129S1/SvImJ MGP_129S1SvImJ_G0009265
 miRNA gene ChrX:15758562-15758618 (-)
A/J MGP_AJ_G0009245
 miRNA gene ChrX:15844912-15844968 (-)
AKR/J MGP_AKRJ_G0009235
 miRNA gene ChrX:16397663-16397719 (-)
BALB/cJ MGP_BALBcJ_G0009229
 miRNA gene ChrX:15612618-15612674 (-)
C3H/HeJ MGP_C3HHeJ_G0009169
 miRNA gene ChrX:15981912-15981968 (-)
C57BL/6NJ MGP_C57BL6NJ_G0009472
 miRNA gene ChrX:16177075-16177131 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0008319
 miRNA gene ChrX:14101980-14102042 (-)
CAST/EiJ MGP_CASTEiJ_G0008998
 miRNA gene ChrX:15274637-15274693 (-)
CBA/J MGP_CBAJ_G0009136
 miRNA gene ChrX:16917764-16917820 (-)
DBA/2J MGP_DBA2J_G0009166
 miRNA gene ChrX:15643649-15643705 (-)
FVB/NJ MGP_FVBNJ_G0009183
 miRNA gene ChrX:15554292-15554348 (-)
LP/J MGP_LPJ_G0009263
 miRNA gene ChrX:16014314-16014370 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0009150
 miRNA gene ChrX:17175637-17175693 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0009442
 miRNA gene ChrX:15681024-15681080 (-)
PWK/PhJ MGP_PWKPhJ_G0008924
 miRNA gene ChrX:14844509-14844565 (-)
SPRET/EiJ MGP_SPRETEiJ_G0008761
 miRNA gene ChrX:15677502-15677558 (-)
WSB/EiJ MGP_WSBEiJ_G0009094
 miRNA gene ChrX:15547660-15547716 (-)



Homology
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Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100885829 NCBI Gene Model | MGI Sequence Detail 57 C57BL/6J ±  kb
transcript NR_049190 RefSeq | MGI Sequence Detail 57 ZRU/MplStud  
For the selected sequence
Other Database
Links
less
miRBase MI0019185
References
more
  • Summaries
    All 4
  • Earliest
    J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory