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Mir5616 Gene Detail
Summary
  • Symbol
    Mir5616
  • Name
    microRNA 5616
  • Synonyms
    mmu-mir-5616
Location &
Maps
more
  • Sequence Map
    Chr4:149622320-149622379 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    26 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5454968
 miRNA gene Chr4:149622320-149622379 (+)
129S1/SvImJ ENSMUSG00200047460
 miRNA gene Chr4:140663557-140663616 (+)
A/J ENSMUSG00195020219
 miRNA gene Chr4:142319540-142319599 (+)
AKR/J ENSMUSG00220048902
 miRNA gene Chr4:141906882-141906941 (+)
BALB/cJ ENSMUSG00180047627
 miRNA gene Chr4:140002141-140002200 (+)
C3H/HeJ ENSMUSG00175019183
 miRNA gene Chr4:143287311-143287370 (+)
C57BL/6NJ ENSMUSG00215027243
 miRNA gene Chr4:142126412-142126471 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0007921
 miRNA gene Chr4:139405159-139405218 (+)
CAST/EiJ ENSTCUG00005036068
 miRNA gene Chr4:145961739-145961798 (+)
CBA/J ENSMUSG00210005983
 miRNA gene Chr4:141938947-141939006 (+)
DBA/2J ENSMUSG00185016639
 miRNA gene Chr4:145500437-145500496 (+)
FVB/NJ ENSMUSG00205045721
 miRNA gene Chr4:140392036-140392095 (+)
JF1/MsJ ENSUMUG00000007868
 miRNA gene Chr4:148514317-148514376 (+)
LP/J ENSMUSG00230017457
 miRNA gene Chr4:152235370-152235429 (+)
NOD/ShiLtJ ENSMUSG00190004289
 miRNA gene Chr4:141607000-141607059 (+)
NZO/HlLtJ ENSMUSG00225024486
 miRNA gene Chr4:156234078-156234137 (+)
PWK/PhJ ENSLUMG00010048579
 miRNA gene Chr4:140789961-140790020 (+)
SPRET/EiJ ENSMSPG00010024986
 miRNA gene Chr4:142712295-142712354 (+)
WSB/EiJ ENSIUOG00005047575
 miRNA gene Chr4:139772654-139772713 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    24
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100885828 NCBI Gene Model | MGI Sequence Detail 60 C57BL/6J ±  kb
transcript NR_049189 RefSeq | MGI Sequence Detail 60 ZRU/MplStud  
For the selected sequence
Other Database
Links
less
miRBase MI0019184
References
more
  • Summaries
    All 6
    Phenotypes 1
  • Earliest
    J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
  • Latest
    J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory