Gm25184 Gene Detail

Summary

• Symbol
  Gm25184
• Name
  predicted gene, 25184

• Feature Type
  snRNA gene
  BioType Conflict
  
• IDs
  MGI:5454961
  NCBI Gene: 115489645
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr2:181154343-181154486 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  17 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5454961	snRNA gene	Chr2:181154343-181154505 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0037784	snRNA gene	Chr2:188113245-188113407 (+)
A/J	MGP_AJ_G0037771	snRNA gene	Chr2:180363635-180363797 (+)
AKR/J	MGP_AKRJ_G0037710	snRNA gene	Chr2:185773922-185774084 (+)
BALB/cJ	MGP_BALBcJ_G0037753	snRNA gene	Chr2:180843120-180843282 (+)
C3H/HeJ	MGP_C3HHeJ_G0037428	snRNA gene	Chr2:186123907-186124069 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0038282	snRNA gene	Chr2:193563880-193564042 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035186	snRNA gene	Chr2:171050744-171050905 (+)
CAST/EiJ	MGP_CASTEiJ_G0036591	snRNA gene	Chr2:184389443-184389605 (+)
CBA/J	MGP_CBAJ_G0037402	snRNA gene	Chr2:200557760-200557922 (+)
DBA/2J	MGP_DBA2J_G0037584	snRNA gene	Chr2:179463439-179463601 (+)
FVB/NJ	MGP_FVBNJ_G0037531	snRNA gene	Chr2:178080854-178081016 (+)
LP/J	MGP_LPJ_G0037636	snRNA gene	Chr2:188135314-188135476 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037544	snRNA gene	Chr2:203122629-203122791 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038392	snRNA gene	Chr2:185741185-185741347 (+)
PWK/PhJ	MGP_PWKPhJ_G0036287	snRNA gene	Chr2:176988645-176988807 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0036066	snRNA gene	Chr2:182241760-182241921 (+)
WSB/EiJ	MGP_WSBEiJ_G0036806	snRNA gene	Chr2:186727924-186728086 (+)

Homology

• Gene Tree
  Gm25184
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000088378 (Evidence)
• NCBI Gene
  115489645

Representative Sequences			Length	Strain/Species
genomic	115489645	NCBI Gene Model | MGI Sequence Detail	144	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm25184:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr22316	Chr2:181153017-181153024 (+)	-1,322 bp