Gm24318 Gene Detail

Summary

• Symbol
  Gm24318
• Name
  predicted gene, 24318

• Feature Type
  snoRNA gene
• IDs
  MGI:5454095
  NCBI Gene: 115486150
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:94452303-94452433 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  12 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5454095	snoRNA gene	Chr2:94452303-94452433 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0039020	snoRNA gene	Chr2:96179041-96179171 (+)
A/J	MGP_AJ_G0039015	snoRNA gene	Chr2:92262011-92262141 (+)
AKR/J	MGP_AKRJ_G0038950	snoRNA gene	Chr2:94842157-94842287 (+)
BALB/cJ	MGP_BALBcJ_G0038998	snoRNA gene	Chr2:92462422-92462552 (+)
C3H/HeJ	MGP_C3HHeJ_G0038662	snoRNA gene	Chr2:95120438-95120568 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0039548	snoRNA gene	Chr2:99432156-99432286 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036265	snoRNA gene	Chr2:88728997-88729127 (+)
CAST/EiJ	MGP_CASTEiJ_G0037802	snoRNA gene	Chr2:95742204-95742334 (+)
CBA/J	MGP_CBAJ_G0038633	snoRNA gene	Chr2:102931447-102931577 (+)
DBA/2J	MGP_DBA2J_G0038822	snoRNA gene	Chr2:91874647-91874777 (+)
FVB/NJ	MGP_FVBNJ_G0038774	snoRNA gene	Chr2:90990137-90990267 (+)
LP/J	MGP_LPJ_G0038861	snoRNA gene	Chr2:96368728-96368858 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038774	snoRNA gene	Chr2:105799765-105799895 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039648	snoRNA gene	Chr2:94944829-94944959 (+)
PWK/PhJ	MGP_PWKPhJ_G0037486	snoRNA gene	Chr2:91630793-91630923 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0037240	snoRNA gene	Chr2:94492958-94493088 (+)
WSB/EiJ	MGP_WSBEiJ_G0038030	snoRNA gene	Chr2:95551662-95551792 (+)

Homology

• Gene Tree
  Gm24318
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  2
• Targeted
  2
• Genomic Mutations
  2 involving Gm24318
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000077678 (Evidence)
• NCBI Gene
  115486150

Representative Sequences			Length	Strain/Species
genomic	115486150	NCBI Gene Model | MGI Sequence Detail	131	C57BL/6J
transcript	XR_004941211	RefSeq | MGI Sequence Detail	131	C57BL/6J

References

• Summaries
  All 6

  Phenotypes 3
• Earliest
  J:100298 Spitz F, et al., Inversion-induced disruption of the Hoxd cluster leads to the partition of regulatory landscapes. Nat Genet. 2005 Aug;37(8):889-93
• Latest
  J:269738 Guerreiro I, et al., Reorganisation of Hoxd regulatory landscapes during the evolution of a snake-like body plan. Elife. 2016 Aug 1;5:e16087