About   Help   FAQ
Mir5625 Gene Detail
Summary
  • Symbol
    Mir5625
  • Name
    microRNA 5625
  • Synonyms
    mmu-mir-5625
  • Feature Type
    miRNA gene
  • IDs
    MGI:5453707
    NCBI Gene: 100885838
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:30805280-30805359 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    19 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5453707
 miRNA gene Chr5:30805280-30805359 (+)
129S1/SvImJ MGP_129S1SvImJ_G0008805
 miRNA gene Chr5:28604418-28604497 (+)
A/J MGP_AJ_G0008789
 miRNA gene Chr5:27664828-27664907 (+)
AKR/J MGP_AKRJ_G0008781
 miRNA gene Chr5:28816298-28816377 (+)
BALB/cJ MGP_BALBcJ_G0008777
 miRNA gene Chr5:28191795-28191874 (+)
C3H/HeJ MGP_C3HHeJ_G0008718
 miRNA gene Chr5:28810335-28810414 (+)
C57BL/6NJ MGP_C57BL6NJ_G0009004
 miRNA gene Chr5:30344744-30344823 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0007939
 miRNA gene Chr5:25154423-25154502 (+)
CAST/EiJ MGP_CASTEiJ_G0008559
 miRNA gene Chr5:27908761-27908840 (+)
CBA/J MGP_CBAJ_G0008684
 miRNA gene Chr5:30939130-30939209 (+)
DBA/2J MGP_DBA2J_G0008715
 miRNA gene Chr5:27853972-27854051 (+)
FVB/NJ MGP_FVBNJ_G0008735
 miRNA gene Chr5:27264699-27264778 (+)
LP/J MGP_LPJ_G0008809
 miRNA gene Chr5:29058343-29058422 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0008699
 miRNA gene Chr5:31831025-31831104 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0008984
 miRNA gene Chr5:28315806-28315885 (+)
PWK/PhJ MGP_PWKPhJ_G0008489
 miRNA gene Chr5:26967623-26967702 (+)
SPRET/EiJ MGP_SPRETEiJ_G0008339
 miRNA gene Chr5:27661156-27661235 (+)
WSB/EiJ MGP_WSBEiJ_G0008657
 miRNA gene Chr5:28387779-28387858 (+)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    21 phenotype references
  • All Mutations and Alleles
    5
  • Chemically induced (other)
    2
  • Radiation induced
    2
  • Spontaneous
    1
  • Genomic Mutations
    5 involving Mir5625
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    22
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100885838 NCBI Gene Model | MGI Sequence Detail 80 C57BL/6J ±  kb
transcript NR_049199 RefSeq | MGI Sequence Detail 80 ZRU/MplStud  
For the selected sequence
Other Database
Links
less
miRBase MI0019194
References
more
  • Summaries
    All 25
    Diseases 1
    Phenotypes 21
  • Earliest
    J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
  • Latest
    J:125425 Howell GR, et al., Mutation of a ubiquitously expressed mouse transmembrane protein (Tapt1) causes specific skeletal homeotic transformations. Genetics. 2007 Feb;175(2):699-707
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory