Gm23676 Gene Detail

Summary

• Symbol
  Gm23676
• Name
  predicted gene, 23676

• Feature Type
  snRNA gene
• IDs
  MGI:5453453
  NCBI Gene: 115488118
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr12:4799752-4799856 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  5 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453453	snRNA gene	Chr12:4799752-4799856 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0037364	snRNA gene	Chr12:1656000-1656104 (+)
A/J	MGP_AJ_G0037352	snRNA gene	Chr12:1636175-1636279 (+)
AKR/J	MGP_AKRJ_G0037294	snRNA gene	Chr12:1813630-1813734 (+)
BALB/cJ	MGP_BALBcJ_G0037341	snRNA gene	Chr12:1673153-1673257 (+)
C3H/HeJ	MGP_C3HHeJ_G0037023	snRNA gene	Chr12:1602926-1603030 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0037855	snRNA gene	Chr12:1689358-1689462 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0036201	snRNA gene	Chr12:1688471-1688575 (+)
CBA/J	MGP_CBAJ_G0036994	snRNA gene	Chr12:2015364-2015468 (+)
DBA/2J	MGP_DBA2J_G0037172	snRNA gene	Chr12:1571807-1571911 (+)
FVB/NJ	MGP_FVBNJ_G0037120	snRNA gene	Chr12:1585674-1585778 (+)
LP/J	MGP_LPJ_G0037221	snRNA gene	Chr12:1680080-1680184 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037133	snRNA gene	Chr12:1760459-1760563 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0037973	snRNA gene	Chr12:1633341-1633445 (+)
PWK/PhJ	MGP_PWKPhJ_G0035898	snRNA gene	Chr12:1629550-1629654 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0035695	snRNA gene	Chr12:1669484-1669588 (+)
WSB/EiJ	MGP_WSBEiJ_G0036410	snRNA gene	Chr12:1633548-1633652 (+)

Homology

• Gene Tree
  Gm23676
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000087939 (Evidence)
• NCBI Gene
  115488118

Representative Sequences			Length	Strain/Species
genomic	115488118	NCBI Gene Model | MGI Sequence Detail	105	C57BL/6J
transcript	XR_004937922	RefSeq | MGI Sequence Detail	105	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;