Gm23645 Gene Detail

Summary

• Symbol
  Gm23645
• Name
  predicted gene, 23645

• Feature Type
  snRNA gene
• IDs
  MGI:5453422
  NCBI Gene: 115487841
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:106151032-106151139 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  6 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5453422	snRNA gene	Chr11:106151032-106151139 (+)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0037346	snRNA gene	Chr11:104887111-104887218 (+)
AKR/J	MGP_AKRJ_G0037288	snRNA gene	Chr11:108014412-108014519 (+)
BALB/cJ	no annotation
C3H/HeJ	MGP_C3HHeJ_G0037017	snRNA gene	Chr11:108303966-108304073 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0037849	snRNA gene	Chr11:112899735-112899842 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034852	snRNA gene	Chr11:102164733-102164840 (+)
CAST/EiJ	MGP_CASTEiJ_G0036195	snRNA gene	Chr11:109359646-109359753 (+)
CBA/J	MGP_CBAJ_G0036988	snRNA gene	Chr11:117599863-117599970 (+)
DBA/2J	MGP_DBA2J_G0037166	snRNA gene	Chr11:104355093-104355200 (+)
FVB/NJ	MGP_FVBNJ_G0037114	snRNA gene	Chr11:103858781-103858888 (+)
LP/J	MGP_LPJ_G0037215	snRNA gene	Chr11:109991242-109991349 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037127	snRNA gene	Chr11:116883844-116883951 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0037967	snRNA gene	Chr11:108507465-108507572 (+)
PWK/PhJ	MGP_PWKPhJ_G0035892	snRNA gene	Chr11:105452031-105452138 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0035689	snRNA gene	Chr11:108269899-108270003 (+)
WSB/EiJ	MGP_WSBEiJ_G0036404	snRNA gene	Chr11:108479195-108479302 (+)

Homology

• Gene Tree
  Gm23645
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000065162 (Evidence)
• NCBI Gene
  115487841

Representative Sequences			Length	Strain/Species
genomic	115487841	NCBI Gene Model | MGI Sequence Detail	108	C57BL/6J
transcript	XR_004937294	RefSeq | MGI Sequence Detail	108	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;