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Mir5620 Gene Detail
Summary
  • Symbol
    Mir5620
  • Name
    microRNA 5620
  • Synonyms
    mmu-mir-5620
  • Feature Type
    miRNA gene
  • IDs
    MGI:5453349
    NCBI Gene: 100885832
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:7298891-7298946 bp, + strand
  • From miRBase annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    11 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5453349
miRNA gene Chr7:7298891-7298946 (+)
129S1/SvImJ MGP_129S1SvImJ_G0008970
miRNA gene Chr7:4423331-4423386 (+)
A/J MGP_AJ_G0008957
miRNA gene Chr7:4279389-4279444 (+)
AKR/J MGP_AKRJ_G0008943
miRNA gene Chr7:4616171-4616226 (+)
BALB/cJ MGP_BALBcJ_G0008943
miRNA gene Chr7:4381174-4381229 (+)
C3H/HeJ MGP_C3HHeJ_G0008881
miRNA gene Chr7:4425366-4425421 (+)
C57BL/6NJ MGP_C57BL6NJ_G0009175
miRNA gene Chr7:4665067-4665122 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0008721
miRNA gene Chr7:4244685-4244740 (+)
CBA/J MGP_CBAJ_G0008850
miRNA gene Chr7:4814939-4814994 (+)
DBA/2J MGP_DBA2J_G0008881
miRNA gene Chr7:4360447-4360502 (+)
FVB/NJ MGP_FVBNJ_G0008900
miRNA gene Chr7:4293706-4293761 (+)
LP/J MGP_LPJ_G0008974
miRNA gene Chr7:4529425-4529480 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0008864
miRNA gene Chr7:4800167-4800222 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0009147
miRNA gene Chr7:4329089-4329144 (+)
PWK/PhJ MGP_PWKPhJ_G0008650
miRNA gene Chr7:4467113-4467168 (+)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0008815
miRNA gene Chr7:4487672-4487727 (+)



Homology
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Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Interactions
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic 100885832 NCBI Gene Model | MGI Sequence Detail 56 C57BL/6J ±  kb
transcript NR_049193 RefSeq | MGI Sequence Detail 56 C57BL/6  
For the selected sequence
Other Database
Links
less
References
more
  • Summaries
    All 4
  • Earliest
    J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
08/04/2020
MGI 6.15
The Jackson Laboratory