Gm22557 Gene Detail

Summary

• Symbol
  Gm22557
• Name
  predicted gene, 22557

• Feature Type
  snRNA gene
  BioType Conflict
  
• IDs
  MGI:5452334
  NCBI Gene: 115490254
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:107450814-107450913 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  52 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5452334	snRNA gene	Chr5:107450812-107450913 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0038021	snRNA gene	Chr5:109321265-109321366 (+)
A/J	MGP_AJ_G0038009	snRNA gene	Chr5:105136942-105137043 (+)
AKR/J	MGP_AKRJ_G0037947	snRNA gene	Chr5:108528129-108528230 (+)
BALB/cJ	MGP_BALBcJ_G0037994	snRNA gene	Chr5:106272770-106272871 (+)
C3H/HeJ	MGP_C3HHeJ_G0037666	snRNA gene	Chr5:108977714-108977815 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0038523	snRNA gene	Chr5:113818193-113818294 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035386	snRNA gene	Chr5:100201671-100201770 (+)
CAST/EiJ	MGP_CASTEiJ_G0036822	snRNA gene	Chr5:107917000-107917101 (+)
CBA/J	MGP_CBAJ_G0037639	snRNA gene	Chr5:117628074-117628175 (+)
DBA/2J	MGP_DBA2J_G0037824	snRNA gene	Chr5:105273536-105273637 (+)
FVB/NJ	MGP_FVBNJ_G0037771	snRNA gene	Chr5:104006996-104007097 (+)
LP/J	MGP_LPJ_G0037869	snRNA gene	Chr5:109916318-109916419 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037778	snRNA gene	Chr5:122565199-122565300 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038638	snRNA gene	Chr5:108096279-108096380 (+)
PWK/PhJ	MGP_PWKPhJ_G0036513	snRNA gene	Chr5:104071999-104072100 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0036284	snRNA gene	Chr5:105602268-105602369 (+)
WSB/EiJ	MGP_WSBEiJ_G0037037	snRNA gene	Chr5:108392833-108392934 (+)

Homology

• Gene Tree
  Gm22557
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000088429 (Evidence)
• NCBI Gene
  115490254

Representative Sequences			Length	Strain/Species
genomic	115490254	NCBI Gene Model | MGI Sequence Detail	100	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;