Gm22330 Gene Detail

Summary

• Symbol
  Gm22330
• Name
  predicted gene, 22330

• Feature Type
  snoRNA gene
  BioType Conflict
  
• IDs
  MGI:5452107
  NCBI Gene: 115485918
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr13:31536963-31537077 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  7 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5452107	snoRNA gene	Chr13:31536963-31537077 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0038695	snoRNA gene	Chr13:29270381-29270495 (+)
A/J	MGP_AJ_G0038687	snoRNA gene	Chr13:28488435-28488549 (+)
AKR/J	MGP_AKRJ_G0038622	snoRNA gene	Chr13:29116006-29116120 (+)
BALB/cJ	MGP_BALBcJ_G0038672	snoRNA gene	Chr13:28589354-28589468 (+)
C3H/HeJ	MGP_C3HHeJ_G0038334	snoRNA gene	Chr13:29123753-29123867 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0039217	snoRNA gene	Chr13:30259711-30259825 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035968	snoRNA gene	Chr13:26866280-26866395 (+)
CAST/EiJ	MGP_CASTEiJ_G0037475	snoRNA gene	Chr13:28785386-28785500 (+)
CBA/J	MGP_CBAJ_G0038306	snoRNA gene	Chr13:31563243-31563357 (+)
DBA/2J	MGP_DBA2J_G0038495	snoRNA gene	Chr13:28020884-28020998 (+)
FVB/NJ	MGP_FVBNJ_G0038448	snoRNA gene	Chr13:27626955-27627069 (+)
LP/J	MGP_LPJ_G0038534	snoRNA gene	Chr13:29500674-29500788 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038446	snoRNA gene	Chr13:31667349-31667463 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039320	snoRNA gene	Chr13:28761093-28761207 (+)
PWK/PhJ	MGP_PWKPhJ_G0037161	snoRNA gene	Chr13:28172809-28172924 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0036918	snoRNA gene	Chr13:27656917-27657032 (+)
WSB/EiJ	MGP_WSBEiJ_G0037705	snoRNA gene	Chr13:29069330-29069444 (+)

Homology

• Gene Tree
  Gm22330
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving Gm22330
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000088693 (Evidence)
• NCBI Gene
  115485918

Representative Sequences			Length	Strain/Species
genomic	115485918	NCBI Gene Model | MGI Sequence Detail	115	C57BL/6J

References

• Summaries
  All 8

  Phenotypes 5
• Earliest
  J:71411 Arkell RM, et al., Genetic, physical, and phenotypic characterization of the Del(13)Svea36H mouse. Mamm Genome. 2001 Sep;12(9):687-94
• Latest
  J:141688 Goldsworthy M, et al., Role of the transcription factor sox4 in insulin secretion and impaired glucose tolerance. Diabetes. 2008 Aug;57(8):2234-44