Gm21286 Pseudogene Detail

Summary

• Symbol
  Gm21286
• Name
  predicted gene, 21286

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:5434641
  NCBI Gene: 102640145
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr4:60792907-60795648 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  22 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5434641	pseudogene	Chr4:60792907-60796701 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	ENSMUSG00220005963	pseudogene	Chr4:56276548-56279214 (+)
BALB/cJ	no annotation
C3H/HeJ	ENSMUSG00175022732	pseudogene	Chr4:56221677-56224343 (+)
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005008288	pseudogene	Chr4:56420015-56422719 (+)
CBA/J	ENSMUSG00210006652	pseudogene	Chr4:56778138-56780421 (+)
DBA/2J	no annotation
FVB/NJ	ENSMUSG00205020043	pseudogene	Chr4:55594788-55597455 (+)
JF1/MsJ	ENSUMUG00000033680	pseudogene	Chr4:56633467-56636181 (+)
JF1/MsJ	ENSUMUG00000033823	pseudogene	Chr4:57211073-57213786 (+)
JF1/MsJ	ENSUMUG00000033776	pseudogene	Chr4:57034220-57036963 (+)
JF1/MsJ	ENSUMUG00000033877	pseudogene	Chr4:57345597-57348317 (+)
JF1/MsJ	ENSUMUG00000033732	pseudogene	Chr4:56870049-56872752 (+)
LP/J	ENSMUSG00230005149	pseudogene	Chr4:60345323-60348064 (+)
NOD/ShiLtJ	ENSMUSG00190042700	pseudogene	Chr4:56144729-56147439 (+)
NZO/HlLtJ	ENSMUSG00225013691	pseudogene	Chr4:65371697-65374438 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm21286
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Endonuclease-mediated
  1
• Genomic Mutations
  1 involving Gm21286
• Incidental Mutations
  APF
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  3

• Ensembl
  ENSMUSG00000094948 (Evidence)
• NCBI Gene
  102640145

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000094948	Ensembl Gene Model | MGI Sequence Detail	2742	C57BL/6J
transcript	ENSMUST00000098035	Ensembl | MGI Sequence Detail	545	Not Applicable

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:334686 Yang H, et al., Mup-knockout mice generated through CRISPR/Cas9-mediated deletion for use in urinary protein analysis. Acta Biochim Biophys Sin (Shanghai). 2016 May;48(5):468-73
• Latest
  J:334590 Greve S, et al., The major urinary protein gene cluster knockout mouse as a novel model for translational metabolism research. Sci Rep. 2022 Aug 1;12(1):13161