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Ccl19-ps6 Pseudogene Detail
Summary
  • Symbol
    Ccl19-ps6
  • Name
    C-C motif chemokine ligand 19, pseudogene 6
  • Synonyms
    Gm21104
Location &
Maps
more
  • Sequence Map
    Chr4:42070757-42153909 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • Strain Annotations
    1
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5434459
 pseudogene Chr4:42070757-42153909 (-)
129S1/SvImJ no annotation
A/J no annotation
AKR/J no annotation
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J no annotation
FVB/NJ no annotation
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    CCL19, C-C motif chemokine ligand 19
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CCL19, C-C motif chemokine ligand 19
  • Synonyms
    CKb11, ELC, MIP-3b, MIP3B, SCYA19
  • Links
    NCBI Gene ID: 6363
    neXtProt AC: NX_Q99731
    UniProt: Q99731

  • Chr Location
    9p13.3; chr9:34689570-34691276 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    22
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Sequences &
Gene Models
less
  • All Sequences
    9
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic 100861647 NCBI Gene Model | MGI Sequence Detail 83153 C57BL/6J ±  kb
transcript NR_169014 RefSeq | MGI Sequence Detail 760 C57BL/6  
For the selected sequence
References
more
  • Summaries
    All 6
    Gene Ontology 1
    Phenotypes 1
  • Earliest
    J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
  • Latest
    J:164563 Mouse Genome Informatics Scientific Curators, Human to Mouse ISO GO annotation transfer. 2010 Oct;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory