Gm21093 Pseudogene Detail

Summary

• Symbol
  Gm21093
• Name
  predicted gene, 21093

• Feature Type
  pseudogene
• IDs
  MGI:5434448
  NCBI Gene: 100861635
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr4:42025429-42026902 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 22.20 cM
• Mapping Data
  1 experiment

Strain
Comparison

• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5434448	pseudogene	Chr4:42021268-42027365 (-)
129S1/SvImJ	ENSMUSG00200005378	pseudogene	Chr4:38739879-38741351 (-)
A/J	ENSMUSG00195003430	pseudogene	Chr4:39099324-39100751 (+)
AKR/J	ENSMUSG00220037333	pseudogene	Chr4:38860091-38861571 (+)
BALB/cJ	ENSMUSG00180027073	pseudogene	Chr4:38686135-38687562 (+)
C3H/HeJ	ENSMUSG00175024481	pseudogene	Chr4:38970150-38971623 (+)
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005004755	pseudogene	Chr4:38713697-38715170 (-)
CBA/J	no annotation
DBA/2J	ENSMUSG00185006289	protein coding gene	Chr4:38997408-39013971 (-)
DBA/2J	ENSMUSG00185006655	pseudogene	Chr4:38997910-38999383 (-)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000030179	pseudogene	Chr4:38917219-38918692 (-)
LP/J	ENSMUSG00230042569	pseudogene	Chr4:42370387-42371860 (-)
LP/J	ENSMUSG00230040177	protein coding gene	Chr4:42375893-42385229 (-)
NOD/ShiLtJ	ENSMUSG00190006501	pseudogene	Chr4:38830938-38832753 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005050259	pseudogene	Chr4:38626775-38628199 (-)

Homology

• Gene Tree
  Gm21093
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Chemically and radiation induced
  1
• Genomic Mutations
  1 involving Gm21093
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  GEO

Sequences &
Gene Models

• All Sequences
  19
• RefSeq
  1
• UniProt
  1

• Ensembl
  ENSMUSG00000082414 (Evidence)
• NCBI Gene
  100861635

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082414	Ensembl Gene Model | MGI Sequence Detail	1474	C57BL/6J
transcript	ENSMUST00000117125	Ensembl | MGI Sequence Detail	1474	Not Applicable
polypeptide	Q6GQS8	UniProt | EBI | MGI Sequence Detail	569	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Other
Accession IDs

MGI:3705775, MGI:3782058

References

• Summaries
  All 8

  Phenotypes 1
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:193309 Mouse Genome Informatics Scientfic Curators, Curated associations of genes in MGI and UniProt sequence records. 2013;