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Mir133a-1hg Gene Detail
Summary
  • Symbol
    Mir133a-1hg
  • Name
    Mir133a-1, Mir1b and Mir1a-2 host gene
  • Synonyms
    Gm21747
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5433911
    NCBI Gene: 105246366
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr18:10781718-10787714 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 18, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    29 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5433911
 lncRNA gene Chr18:10781718-10791734 (-)
129S1/SvImJ MGP_129S1SvImJ_G0003430
 antisense lncRNA gene Chr18:7724310-7728453 (-)
A/J MGP_AJ_G0003408
 antisense lncRNA gene Chr18:7672186-7676346 (-)
AKR/J MGP_AKRJ_G0003389
 antisense lncRNA gene Chr18:7874011-7878171 (-)
BALB/cJ MGP_BALBcJ_G0003397
 antisense lncRNA gene Chr18:7656616-7660776 (-)
C3H/HeJ MGP_C3HHeJ_G0003347
 antisense lncRNA gene Chr18:7767125-7771285 (-)
C57BL/6NJ MGP_C57BL6NJ_G0003537
 antisense lncRNA gene Chr18:8178668-8182828 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003050
 antisense lncRNA gene Chr18:7349209-7353424 (-)
CAST/EiJ MGP_CASTEiJ_G0003309
 antisense lncRNA gene Chr18:7663177-7667331 (-)
CBA/J MGP_CBAJ_G0003343
 antisense lncRNA gene Chr18:8239663-8243823 (-)
DBA/2J MGP_DBA2J_G0003352
 antisense lncRNA gene Chr18:7540029-7544189 (-)
FVB/NJ MGP_FVBNJ_G0003370
 antisense lncRNA gene Chr18:7487692-7491852 (-)
LP/J MGP_LPJ_G0003424
 antisense lncRNA gene Chr18:7851499-7855642 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0003358
 antisense lncRNA gene Chr18:8483430-8489487 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0003539
 antisense lncRNA gene Chr18:7703759-7709371 (-)
PWK/PhJ MGP_PWKPhJ_G0003268
 antisense lncRNA gene Chr18:7573026-7577169 (-)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0003345
 antisense lncRNA gene Chr18:7679988-7684148 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000095438 Ensembl Gene Model | MGI Sequence Detail 5997 C57BL/6J ±  kb
transcript ENSMUST00000241298 Ensembl | MGI Sequence Detail 681 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 7
    Gene Ontology 1
    Phenotypes 4
  • Earliest
    J:202466 Wystub K, et al., miR-1/133a clusters cooperatively specify the cardiomyogenic lineage by adjustment of myocardin levels during embryonic heart development. PLoS Genet. 2013 Sep;9(9):e1003793
  • Latest
    J:328212 Klockner I, et al., Control of CRK-RAC1 activity by the miR-1/206/133 miRNA family is essential for neuromuscular junction function. Nat Commun. 2022 Jun 8;13(1):3180
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory